Gene RPD_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_1001 
Symbol 
ID4021476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1131912 
End bp1132166 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content59% 
IMG OID637961192 
Producthypothetical protein 
Protein accessionYP_568140 
Protein GI91975481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.38863 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.790875 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTACTT TCAGCGGATT GCCCTACGAC GCCAATATGC CGGCGATCGT CTGGGCGCTC 
TATCTCGTGG CTGCGGTGCT GTACTGCAGT CCGATGACGA TCGGATTCAT CCGAAACGTG
GAATACAAAT GGCCGCTATA TTTCGGCAAC CTGCTGGCGG GTTGGACCGG AATCGGCTGG
GCCTATTGCC TGTACTACGC GATCTTCGCC GATCGTGAGC ACGCGCCGAG CCAGCCAGTG
GCCCTCGCCG CATAG
 
Protein sequence
MFTFSGLPYD ANMPAIVWAL YLVAAVLYCS PMTIGFIRNV EYKWPLYFGN LLAGWTGIGW 
AYCLYYAIFA DREHAPSQPV ALAA