Gene RPD_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0973 
Symbol 
ID4021448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1103885 
End bp1104619 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content70% 
IMG OID637961164 
Producthypothetical protein 
Protein accessionYP_568112 
Protein GI91975453 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.671171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGAAAG CAGCGACCCT TCTGGCCCTG GTATGCGTCC TGATCGCGGG CGCATCCGCC 
GCAACGATTC TGGCGCGCGA GAGCGTGCCG GCCGCCGGCC CGGCTTTCGC CATGGCGGCG
GTCGAGGGTC CGGTCGCCAA CCGAGAGAGC AAGGCGGACA GGCTGGCGCG GACCTCTGCA
GCGGCCGATG CCCCGATTGC TCCGGAAGAC GCCGCCCCGG CGCAGGACGA CGGCCAACAG
CTTGCCGCCG AGGAGCCCGC CGCGTCGCAG AAGCCGGTGC AGCTCGCTTA TGCGGCCGAC
GACGTCAGTG GCCTCGCGGT CGGCGCAATG CCCGATCAGG CCGACCGGGC CGCCAATTCG
GCGCCCGTGA CCAAGCTTCC CCCGGTGATC GCGACCGCAC CGGCGCAAAA GCCGAAGCCT
GCCGCCAAGC CGAAGCCGCC CGCGCTGCTC AGCGATGCGC AGATCACCCA GATCAAGGGT
CGCCTCAACC TGTCGTCCTC GCAGGAATAT TTCTGGCCCT CGGTCGAGCA GGCGCTGCGC
GCGATCGGCC GCAAACTGCA CGCGACGCGC GTCGCAGATA GCGGCCCGCC GCCGATCGAT
CCCGACAGCG CTGAAGTGCA GCAGCTGAAA TACGCCGCGA TGCCGCTGCT GTTCCAGCTC
CGCGAAGACC AGAAGCAGGA AGTCCGCAAG CTCGCCCGCG CGATGGGCCT CGAGCAGGTC
GCCCAGCAGA TCTGA
 
Protein sequence
MTKAATLLAL VCVLIAGASA ATILARESVP AAGPAFAMAA VEGPVANRES KADRLARTSA 
AADAPIAPED AAPAQDDGQQ LAAEEPAASQ KPVQLAYAAD DVSGLAVGAM PDQADRAANS
APVTKLPPVI ATAPAQKPKP AAKPKPPALL SDAQITQIKG RLNLSSSQEY FWPSVEQALR
AIGRKLHATR VADSGPPPID PDSAEVQQLK YAAMPLLFQL REDQKQEVRK LARAMGLEQV
AQQI