Gene RPD_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0970 
Symbol 
ID4021445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1101431 
End bp1102207 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content66% 
IMG OID637961161 
Producthypothetical protein 
Protein accessionYP_568109 
Protein GI91975450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.431239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTAC GTGTGATCTT GTCCGCTTCG GCGGCCCTGC TGCTGTCGTC CGCCGCCGCC 
AATGCCGCGC AGGTTGCGGC GCTGATCGGC GGTGACACCA TCGCGATGGT CGACACAACG
CAAAAAAGAG CGACCGGATC GGTCAAGGTG ACCGGAATCT CCGGTTCGCT GGTCGGCATC
GACGTGCGCC CGGCCGACGG TCTGCTGTAC GGGCTGGTCG ACGACGGCAG CGTGGTGACG
ATCGCGATGG ACGGCAAGGC CACCGTGAAG TCGAAGCTCG ATACCACGCT CGCCAAGGGC
GTCGCCGCGA CCGTCGACTT CAACCCGATG GCGGATCGGC TGCGCGTGAT GGGCGCCGAC
GGCACCAATC TGCGCGCCAA TGTCGACGAC GGCAAGGTCA CCAAGGACGG CGATCACAAA
TATGCCGACG CCGACATGCA CAAGGGCGAG AAGCCGAACA TCGTCGCCGG CGCCTACACC
AATTCGGTGA AGGGCGCGAA GGAGACCGCG CTGTTCAACA TCGACGGCAG CATCGGGGGC
CTGATCAAGC AGGCGCCGCC GAATGACGGC GTGCTCGGCG CAATCGGCAA GCTCGGCATC
AAGGCGGACG GCGTCGCGTT CGACATCTGG TCCGACGGCG CAGGCAAGAA CGAGGCCTGG
CTGATGGCGG GCGATACGCT GTACAGCGTC GACCTGGCGA CCGGCAAGGC GACCGAAGCC
GCAAAGATCA GCGGCGTCGG CGGCGCCGTG AAGGACATCG CGATCATCGC GATGTAA
 
Protein sequence
MTLRVILSAS AALLLSSAAA NAAQVAALIG GDTIAMVDTT QKRATGSVKV TGISGSLVGI 
DVRPADGLLY GLVDDGSVVT IAMDGKATVK SKLDTTLAKG VAATVDFNPM ADRLRVMGAD
GTNLRANVDD GKVTKDGDHK YADADMHKGE KPNIVAGAYT NSVKGAKETA LFNIDGSIGG
LIKQAPPNDG VLGAIGKLGI KADGVAFDIW SDGAGKNEAW LMAGDTLYSV DLATGKATEA
AKISGVGGAV KDIAIIAM