Gene RPD_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0954 
Symbol 
ID4021429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp1073259 
End bp1074062 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content70% 
IMG OID637961145 
Producthypothetical protein 
Protein accessionYP_568093 
Protein GI91975434 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTCAAG TGTTTGAAAT GCTGCGCCTT CAGCGCTCAG CCGCGCTCGC CGCGGCGCTA 
TTTGTCGGGA CCCCGGTGGC GCTGATCCCG GCGCCCGCCT CCGCGCAGAA CATCCTCGAA
ATGCTGTTCG GCGGCGCCGG CCCGCAGCGG CCGCAACAGC GCAGCGCGCC GGCGCAGGCG
AGTTTCTTTG CCGATCCGTT CGGACTCAAT CAGCAGGCGG CACCGCCGCC GGCGCCGCGT
CAGGTCGCCT CGGGCGGCGG GCCTGCGTTC TGTGTCCGCA GCTGCGACGG CAAGTATTTT
CCGCTGCAGG CGCGCGGCGG CGCGACGCCG GCGCAGATGT GTCAGGCGTT CTGCCCGGCC
GGCAACGCCA AGGTGTATTA CGGCAGCCAT ATCGACAGCG CGACCGCGAG CAACGGCCAG
CGCTATGCCG ACAGCGAAAA CGCCTTCGCC TATCGCAAGG CGCTGAAGGC CGACTGCACC
TGCAACGGCC GCAACCCGGC CGGCCTCGCG CCGGTCGATC TGTCGCTCGA CACCTCGCTG
CGCCCCGGCG ACATCGTCGC CACCGCGACC GGGCTCGCCG CCTATAATGG CGTCCGCCTC
GGCGCCGAAC AGACCCCCGA TTTCACCCCG GTCGCCGATT ATCCCGGGTT GACCACGCAG
ATTCGCGCCC GGCTCGGCGA GATGAAAGTT GCGCCGGTCA ATGCCGAACT GATCGCCGAA
CAAGTGCCGG TGGTCGCCCG CGACGTCTCG CTGCCGATCG CCTCGCCGAA GCCCGTGCAG
GGCCGGCGTG CGGCGGTAGA CTGA
 
Protein sequence
MRQVFEMLRL QRSAALAAAL FVGTPVALIP APASAQNILE MLFGGAGPQR PQQRSAPAQA 
SFFADPFGLN QQAAPPPAPR QVASGGGPAF CVRSCDGKYF PLQARGGATP AQMCQAFCPA
GNAKVYYGSH IDSATASNGQ RYADSENAFA YRKALKADCT CNGRNPAGLA PVDLSLDTSL
RPGDIVATAT GLAAYNGVRL GAEQTPDFTP VADYPGLTTQ IRARLGEMKV APVNAELIAE
QVPVVARDVS LPIASPKPVQ GRRAAVD