| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0915 |
|---|
| Symbol | |
|---|
| ID | 4021390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007958 |
|---|
| Strand | - |
|---|
| Start bp | 1032793 |
|---|
| End bp | 1033665 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637961106 |
|---|
| Product | molybdopterin dehydrogenase, FAD-binding |
|---|
| Protein accession | YP_568054 |
|---|
| Protein GI | 91975395 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACCGT TCTCCTATCA GCGCGTCGCC GATCCGTCGG CCATCGCGAA GCACCTCGCC
GCCTCCCCGG CCGATCAAAC CGAAACGACG CCGCTCAACG ACGGCTCGGT GCAGTTCCTC
GCAGGCGGCA CCACGCTGAT CGACCTGATG AAGCTCGACG TGATGCGGCC GGCGACGGTG
ATCGACATCA ACGCGCTGGC GCCGCAATGG GCCAGAATTG CCGCGACCAG CGACGGGCTC
AAGCTCGGCG CGCTGGCGAA GATGTCGGAC GTCGCCGTGC ATGGCGCGGT GCTGCGCGAC
TATCCGGTGA TCGCCGACAC GCTGAAGCTC GCCGCCAGCG CGCAGCTGCG CAACATGGCG
ACGCTCGGCG GCAATGTCCT TCAGCGGACC CGCTGCAGCT ATTTCCGCGA CGTCTCCTAC
GCGGATTGCA ACAAGCGCAA TCCGGGCTCG GGCTGCGCCG CGATGGACGG CGTCAACCGG
CTTCACGCCG TGCTCGGCGC CAGCGATCAG TGCATCGCCA CCTATCCGGG CGATTTCGCC
CAGGCGCTGA TCGCGCTCGA GGCCAGCGTC GACATCGCCG GCCGCGCCGG CGAGCGGACC
ATCCCGTTCG CCGAACTGCA CAAGACGCCG GGGTCGACGC CGCAGATCGA AACGACGCTG
GCGGAAGGCG ACCTGATCAC CGGCTTCAAG ATCCCGGGCC GCTGGCCGCG CTCGGTGTAT
CTGAAGGCGC GCGACCGGCA GTCCTACGAG TTCGCGCTCG CCTCCGCGCG GTGGCGCTGG
ATATCGCCGA CGGCACCGTC CGCGACGCGC GGATCGCGCT CGGCGGCGTC GCCACCGCGC
CGTGGCGCGC CACGGAGGCC GAGGCGCTGC TGA
|
|---|
| Protein sequence | MRPFSYQRVA DPSAIAKHLA ASPADQTETT PLNDGSVQFL AGGTTLIDLM KLDVMRPATV
IDINALAPQW ARIAATSDGL KLGALAKMSD VAVHGAVLRD YPVIADTLKL AASAQLRNMA
TLGGNVLQRT RCSYFRDVSY ADCNKRNPGS GCAAMDGVNR LHAVLGASDQ CIATYPGDFA
QALIALEASV DIAGRAGERT IPFAELHKTP GSTPQIETTL AEGDLITGFK IPGRWPRSVY
LKARDRQSYE FALASARWRW ISPTAPSATR GSRSAASPPR RGAPRRPRRC
|
|---|
| |