| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0860 |
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| Symbol | |
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| ID | 4021334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 964111 |
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| End bp | 965280 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637961050 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_567999 |
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| Protein GI | 91975340 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.474349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTTGC CGCGCAATCG TGTGATCATC GGCATTCTCG CGCTCGCCGC CGTAGCCACC
GTCAGCGACG CGGCGTTGCA TTCCGTATGG GCGCAGAATC CGTTCGGCGG GCCGCGGCCG
CCGGCGGAGC CGCAGTCCGG CGGCCTGTTC GGCTGGCTGA TGGCGCAGCA ATCGGCGTTT
TATCGTCAGA TGTCGGCGAC GATCCGCGCC GCCAAGGCCG ATGGCAGCGC GGTCTGGACC
CTGCTCGGCA TTTCGTTTGC CTATGGCGTG TTCCATGCCG CCGGCCCCGG CCACGGCAAG
GCGGTGATCT CGTCCTATCT GGTCGCCAAT GAAGAGACCG CGCGGCGCGG CATCGCGCTG
TCGTTCATCT CGGCGATGCT GCAGGCGCTG GTCGCGGTGC TGATTGTCGG CATCTGCGCC
TGGCTGCTCA ACGCCACGGC GAAGACGATG TGCAGCGCGG AACGGGCGAT CGAAATCGTC
AGCTACGCCC TGATCGCGCT GTTCGGCGCG CGGCTGGTCT GGAGCAAGGG CGGCGGCTTC
TTCCGAGCCT TGCAGGGCGC GACCGGCAAG CCGACGCTGG CGTTCGCGAC CGCGCCGGGC
ACCGCTGATG CCAGCGCCGT CCTCCACGGG CGGGACCACG GCCACGATCA TTCCCAATCG
CCGCAGGCCC AAGCGCTGCA GGCTCATGCC GGGCATGATC ACGCCCACGG TCACCCGCAT
CATCACCACG ACGGGGCGCA CCATCATCCG GCCCATGGCC ATGCCGATCA CGATTGCGGC
GACCATTGCG GCCATTCGCA CAGTCCGGAA CCGGCGGAAC TCGCCGGCCC CGGCGGTTGG
CGGCGCGGGC TCGGCGCGGT GCTGACGGTC GGCATCCGTC CCTGCTCGGG CGCGATCCTG
GTGCTGGTAT TCGCGCTGGC GCAGGGGTTG TTCTGGGCGG GAATCGCCGC GACCTTCGCG
ATGGGGCTTG GCACCGCCAT CACCGTGGCG GCGATTGCGA CGATTGCGGT GTCCGCCAAG
GGGCTGGCGC AACGGCTCAC GGCCGGCCAT GCGGGCGGCG GCGTGCTGTT CATGCGCGGT
CTGGAATTCG GTGCGGCCGG GCTGGTGCTG CTGTTCGGTA TCGGGCTTCT ACTAGGCTAC
ATTGCCGCCG AGCGCGTGAC CTGTCTTTAA
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| Protein sequence | MSLPRNRVII GILALAAVAT VSDAALHSVW AQNPFGGPRP PAEPQSGGLF GWLMAQQSAF
YRQMSATIRA AKADGSAVWT LLGISFAYGV FHAAGPGHGK AVISSYLVAN EETARRGIAL
SFISAMLQAL VAVLIVGICA WLLNATAKTM CSAERAIEIV SYALIALFGA RLVWSKGGGF
FRALQGATGK PTLAFATAPG TADASAVLHG RDHGHDHSQS PQAQALQAHA GHDHAHGHPH
HHHDGAHHHP AHGHADHDCG DHCGHSHSPE PAELAGPGGW RRGLGAVLTV GIRPCSGAIL
VLVFALAQGL FWAGIAATFA MGLGTAITVA AIATIAVSAK GLAQRLTAGH AGGGVLFMRG
LEFGAAGLVL LFGIGLLLGY IAAERVTCL
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