Gene RPD_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0798 
Symbol 
ID4021272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp898317 
End bp899036 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content69% 
IMG OID637960988 
Productmetallophosphoesterase 
Protein accessionYP_567937 
Protein GI91975278 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.235454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.258501 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCG ACAGAACGGG TTGCCTTCTC ACTCCCTCCC CGCAAGGGGG AGAGGAGCAG 
ACTGTCGCTG TCGCCGACGT CACGCTGGTC GCGGATCTTT CGGGCGCGCT GTACTGGCCC
GACGAGCGGC TGCTGGTGGT CTCTGACCTG CATCTGGAAA AAGGCTCGAG CTTCGCGATG
CGCGGCGTGC TGCTGCCGCC TTACGACACC GTCGCAACGC TCGGCCGCCT CGGTGCGGTG
ATCGCGCGCT TCGATCCGAA AACCGTGATT GCGCTCGGCG ACAGCTTTCA TGATCGCGAC
GCGCATGACC GGCTGTCCAA CGCCAATCGC GACATCCTGA CCGCGCTGCA GGTGGGGCGC
GACTGGATCT GGATCGCCGG CAACCACGAT CCGGCGCTGC CCGCCGATCT CGGCGGTTGC
GTCGCCGAAG AGGTCGCGCT CGGCGGCGTC GTGTTCCGGC ACGAGCCGAC CGGGGCGCAT
GGCGAGATTG CGGGACATCT GCACCCCAAG GCCCGCGTCA GCCGCCGCGG CCGCAGCGTC
GAGCGGCGCT GTTTTGCCGG CGACGGCGGG CGCGTGGTGA TGCCGGCGTT CGGCGCCTAT
GCGGGCGGGC TCAACATTCG GGACGCGGCC TTTGCCAGGC TGTTCGGCAG CGCCGCCTTC
ATGGCGCATG TGCTCGGCGA CCACCGGCTG CACGCCATCG CCGCTTCGCG CTGCGTCTAG
 
Protein sequence
MKRDRTGCLL TPSPQGGEEQ TVAVADVTLV ADLSGALYWP DERLLVVSDL HLEKGSSFAM 
RGVLLPPYDT VATLGRLGAV IARFDPKTVI ALGDSFHDRD AHDRLSNANR DILTALQVGR
DWIWIAGNHD PALPADLGGC VAEEVALGGV VFRHEPTGAH GEIAGHLHPK ARVSRRGRSV
ERRCFAGDGG RVVMPAFGAY AGGLNIRDAA FARLFGSAAF MAHVLGDHRL HAIAASRCV