Gene RPD_0781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0781 
Symbol 
ID4021255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp877563 
End bp878411 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID637960971 
Producthypothetical protein 
Protein accessionYP_567920 
Protein GI91975261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0145129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG CCACCGGCGA ACATCACCGC AAACGGCGGC GCCATCCCCG GCTGCGACGC 
GCGGGGCTGA TCACCGCGCT GTTCGTGACC GTCTACGCGC TGGCCGCCTA TCTGGCCTTG
CCGCTGTTCT GGACCCACTA CGAACATCAA CGCGGGCTGG CCGATATGCC GATGGCGACG
CGGACTGCGC AGGGCATTCC CGGCGACCCG ATCAATGTCG GACTGATCGG CAACCAGAAA
GACGTGGTCT GCGCCATGCT CGCGGCGAAC TGGACGCCCG CCGACCCGCT GACGCTGAGC
TCATCGATCG AAATCGCCGG CAGCGTTCTG CTCGACCGGG CGTATCATCA CGCACCGGTG
TCGAACTTGT ACTATCTCGG CCGTCGTGAG GATCTCGCTT TCGAGAAGCC GGATGGCCGC
AGCGCCGACC GACGTCATCA TGTCCGGCTG TGGAAGGTGC TCGACAGCGG CGATGAGGGC
CGCCCGGTCT GGCTCGGCGA CGCCACCTTC GATCGCGGCG TCGGCGTCAG CAAATACACC
GGCGCGGTGA CGCATCACAT CGATCCCGAC ATCGACGCCG AGCGCGGCCT GCTTGCTTCC
GATCTCGAAG CCGCGGCGAT GGTCGATGCG AAATACCAAG TCACCGGCAT CGGCCCGACG
ATCGCCGGAC ACAACGGCGA AGGCGACCGC TACTACACCG ACGGCGAAGT CTGGATCCTG
CGGCTGGTCG ACGGCTGCAA GAAGCGCAGC AGCCCTGCCG CCGTTCTGCC GAGCCCGCTC
GCGACCGAGA TCAAGGACCG GATTTTCCGC ACCGTCACCG ACGCCGTCGC CGGTCCGCCC
GCGCCTTGA
 
Protein sequence
MNDATGEHHR KRRRHPRLRR AGLITALFVT VYALAAYLAL PLFWTHYEHQ RGLADMPMAT 
RTAQGIPGDP INVGLIGNQK DVVCAMLAAN WTPADPLTLS SSIEIAGSVL LDRAYHHAPV
SNLYYLGRRE DLAFEKPDGR SADRRHHVRL WKVLDSGDEG RPVWLGDATF DRGVGVSKYT
GAVTHHIDPD IDAERGLLAS DLEAAAMVDA KYQVTGIGPT IAGHNGEGDR YYTDGEVWIL
RLVDGCKKRS SPAAVLPSPL ATEIKDRIFR TVTDAVAGPP AP