Gene RPD_0666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0666 
Symbol 
ID4021137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp752035 
End bp752757 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content63% 
IMG OID637960854 
Productresponse regulator receiver 
Protein accessionYP_567805 
Protein GI91975146 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGGCG CACCGCTCAA GATTCTGATC GTCGACGACG AACCGCCGAT CCGCAAATTG 
CTGCGCATGG GCCTGGGCAC GCAGGGCTAC GAGGTGCTGG AAGCGTCCAA CGGCAAGATC
GCGCTCGAGC TTCTGAAGCA GGGGCCGGCG TTGATCATCC TCGATCTCGG CCTTCCCGAT
ATTCAGGGCC ACGAATTGCT GCGCATGATC CGGGGGCGCA ATGACAGCGT GCCGATCGTG
GTGCTGTCGA GCCGCGGCGA CGAGGCCGGC AAGGTCGAGG CGCTCGATCT GGGCGCCGAC
GATTATCTGA CCAAGCCGTT CGGCATGGAT GAGTTGCTGG CGCGGATGCG CGCGGCGCTG
CGGCACCAGC TCCAGGTTCA CGGCGAGCGG CCGGTGTTTC GTTCGGGCGA TCTGTCGGTC
GATCTGGTCA GACGCCTGGT CAAGGTCGGC GACAGGGACG TGAAGTTGTC GCCGAAAGAA
TACGATCTGC TCAGGATCTT GGTGCAGCAC GCCGGCAAAG TGCTGACGCA CAAATTCCTG
CTCGGTGAGC TGTGGGATCC GTTGACCGAC GCGCAATATC TGCGGGTCTA TGTCCGGCAA
CTCCGACAGA AGATCGAAGC CGATCCGGAG CGGCCGCAAT TCGTCCTCAC CGAAACCGGC
ATCGGCTACA GGCTTCGCGC CCCCGACGAC CCTGCGAAGA CCGTGCTTTC TCTCGAACAC
TGA
 
Protein sequence
MNGAPLKILI VDDEPPIRKL LRMGLGTQGY EVLEASNGKI ALELLKQGPA LIILDLGLPD 
IQGHELLRMI RGRNDSVPIV VLSSRGDEAG KVEALDLGAD DYLTKPFGMD ELLARMRAAL
RHQLQVHGER PVFRSGDLSV DLVRRLVKVG DRDVKLSPKE YDLLRILVQH AGKVLTHKFL
LGELWDPLTD AQYLRVYVRQ LRQKIEADPE RPQFVLTETG IGYRLRAPDD PAKTVLSLEH