Gene RPD_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0646 
Symbol 
ID4021117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp731296 
End bp731760 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content70% 
IMG OID637960834 
Producthypothetical protein 
Protein accessionYP_567785 
Protein GI91975126 
COG category[S] Function unknown 
COG ID[COG1833] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.269467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAC CGCAACTCGC TCAATGTCCC GACCGCAAAG GCGCTTACGT CGTCGCGCTG 
GCGATCGCCG CGCCGATCGA GATTCGGCTC GGCAAGGCCG CGCCGGCGGT GCTGCGCGCC
GGGCGCTATC TGTATTGCGG CTCGGCCTAT GGTCCCGGCG GATTGCGCGC GCGGCTCGGC
CGGCATTTTC GCAAGACCAA GACCCTGCGC TGGCATGTCG ATCGTTTGAC CACAGCCGGC
GAGGTGCGCG GCGCCTGGGC GATCACGCAA GGCGATGAAT GCGAGCTGGT GCGCCGGCTC
GGCTTTCTTA CCGCTCCGAT CGACGGGTTC GGCGCCAGCG ATTGCGCGCA TTGCCGCAGC
CATCTGCTGC GCTGGCCGCA GCGCATCCCC CGCTCGGCGA TCGTCGCGGC GCTCGCCGCC
GATCGCAGCG CCGCTCCGGT CTGGCTGCGC GCCGAGCGTG AATGA
 
Protein sequence
MPQPQLAQCP DRKGAYVVAL AIAAPIEIRL GKAAPAVLRA GRYLYCGSAY GPGGLRARLG 
RHFRKTKTLR WHVDRLTTAG EVRGAWAITQ GDECELVRRL GFLTAPIDGF GASDCAHCRS
HLLRWPQRIP RSAIVAALAA DRSAAPVWLR AERE