Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0640 |
Symbol | |
ID | 4021111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 727743 |
End bp | 728798 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637960828 |
Product | nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_567779 |
Protein GI | 91975120 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.533674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG ACACACTCGC AGCATGGCAG CCGCCTTTGA TCGCGCCGGT CGACCGCGCG CTGGAGGCTT CGTTGCGCGC GCGAATCGAC GGTAAGGCCA AGCCGCTCGG CTCGCTCGGC CGGATCGAGG AACTGGCGAT CGAACTCGGC GCGATCAGCC ATCCCGCGGA ACCGCGCGGC GACAACGCGG TGCTGATGGT GTTCGCCGGC GACCATGGGC TGAACGCCGA AGGCGTTTCG CAATATCCGT CGGCGGTGAC GGTGGCGATG GTGATGACCT ATCTGGCGGG CAAGGCGTGC GCCAATGCGT TCGCCACCGC GTGCCGCGTC GACGTCCAGG TGATCGATTC CGGCGTCGCC GCCGAACTGC CGGCTCATCC CGATCTGATC GACGCCAAGG TGCGGATGGG CACCGGCAAT GCCGCGCGCG AGCCGGCGAT GAGCGCGCAG GACGCCGCGT TGGCGCTGAC CCGCGGCATC GAACTGACTG TCGCCGAAAT CAAGGCCGGC GCCGATATCA TCGCGCTGGG CGAAATGGGC ATCGGCAACA CCGCGTCGTC GTCGCTGTTG CTGCATCGGC TGGCGCCGGC GCCGCTCGCG GATTGCATCG GCGTCGGCGC CGGGCAGGAC GCGCCCGGCA TGGCGAAGAA GCGCGCCGCG ATCGAGATGG CGGCCGCGCG CAGTGATGCG ACCGCGCCGT TCGAGGTGCT GTGCGAATTC GGCGGGCTGG AAATCGCGAT GATGACCGGC GCGATTCTCG GCGCGGCGTC GCAGCGCCGG CCGGTGATCG TCGACGGTTT TATCGCGACC GCGGCGGCGC TGCTCGCGGT GCGGCTGGCG CCCGCGGCGC GCGGCTATTG CGTGTTCGCG CATCGCTCCG CCGAGCGCGG CCACGACATC GCGCTGCAAG CGCTGCGGGC GAGACCGCTG CTCGATCTCG ACCTGCGGCT CGGCGAAGGC ACCGGCGCGA TCCTGGCGGT GCCGCTGCTC CGCGCCGCGG CGCGGCTGTC GACCGACGTC GCCGATCTCA GCGATGTGCT GGAGGGCAAG CTGTGA
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Protein sequence | MPIDTLAAWQ PPLIAPVDRA LEASLRARID GKAKPLGSLG RIEELAIELG AISHPAEPRG DNAVLMVFAG DHGLNAEGVS QYPSAVTVAM VMTYLAGKAC ANAFATACRV DVQVIDSGVA AELPAHPDLI DAKVRMGTGN AAREPAMSAQ DAALALTRGI ELTVAEIKAG ADIIALGEMG IGNTASSSLL LHRLAPAPLA DCIGVGAGQD APGMAKKRAA IEMAAARSDA TAPFEVLCEF GGLEIAMMTG AILGAASQRR PVIVDGFIAT AAALLAVRLA PAARGYCVFA HRSAERGHDI ALQALRARPL LDLDLRLGEG TGAILAVPLL RAAARLSTDV ADLSDVLEGK L
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