Gene RPD_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0639 
Symbol 
ID4021109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp726848 
End bp727435 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content71% 
IMG OID637960827 
Producthypothetical protein 
Protein accessionYP_567778 
Protein GI91975119 
COG category[S] Function unknown 
COG ID[COG5469] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.561471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGCTTT GGAGGCGTCG GGGCGGGGTG CACCGGACGG ACAGCAGGGC GGTGGCGCAT 
CGATCGTCAC CCCGCGCGAT CCGACAAAGC TCGAAGCCGC AAGGCGTTGC CGAGAGCCAG
GGCATGGATC GCAGCCCCGA CCACGATCAC ACCACCGCGC CAACCGCTGA GCTGCAGACC
GATATCACGA CTGACGGTTC CACACGGCCC GCGGGTCCGG TGGTGATCAG CGTCTGCATC
AGTTGCAAGG CCGCCGACGG CAGCAATGCC GGCGCGCCGA TGCTCGACGC GATCCGGGCC
GCGCAGGGCG GCGCGGCCGA TCTGCGGGTG CGGCCGGTGC AGTGCCTCAG CGTCTGCAAG
CGCGCCGCCA CCGTCGCGGT GTCGAGCGCC GACGGCTACA GCTTCGTGTT CGGCGATCTC
GTCCCCGAGA CCGGAGCCGA CGCGATCATC GGCTTCGCCG CCGCGTATCA GCACAGCGAT
TACGGCCTGG TGCCGTGGCG CCAGCGCGCC GACGTCCTGC GCAAAGGCAT GGTCGCGCGG
CTGCCGCCGC TGCGCTGGTC GCCCGACGAC GGGCGTGCGC CGTCATGA
 
Protein sequence
MVLWRRRGGV HRTDSRAVAH RSSPRAIRQS SKPQGVAESQ GMDRSPDHDH TTAPTAELQT 
DITTDGSTRP AGPVVISVCI SCKAADGSNA GAPMLDAIRA AQGGAADLRV RPVQCLSVCK
RAATVAVSSA DGYSFVFGDL VPETGADAII GFAAAYQHSD YGLVPWRQRA DVLRKGMVAR
LPPLRWSPDD GRAPS