Gene RPD_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0605 
Symbol 
ID4021074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp685502 
End bp686233 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content66% 
IMG OID637960793 
Productregulatory proteins, IclR 
Protein accessionYP_567744 
Protein GI91975085 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTTC GCCAGGCCGC CAATGTGCTG GAGATTCTCG AGTACTTCGC GCGGGTGAAG 
AAACCCGCGA CGCTGGCGGA GATCGCCGAT CATTTCGGCT GGCCGCGCTC ATCCACCTTC
AACCTGCTGA CCACGCTGGC GGACAAGGGC TACCTCTACG AGCCGCGTCC GCGCGCCGGC
TACTACCCTA CGCCGCGCTG GCTGGTGCTG GCCCGCGAAG TCTCCGAGGT CGAGCCGCTG
CCGGCCTGGA GCCGCGCGCT GATCACCAGC CTGTCGTCCG AAACCGGCGA GACCGTCGCC
ATCGCCGCGC CGGCCGGGGT GATGGCGGTC TTCATCGACG TGATCGAGTC CAGCGCGGCG
ATCCGCTATT TCGCGCACAT CGGGCACCGC GTTCCGATCC ACGCGACCTC GAGCGGCCGC
GCGCTGCTGC TGCAATATTC GCAGGATGAG CGCGACTCGC TGTATCGCAA GATCGAATTC
AAACAGTACA ACCCCTCCAC GCCGATCAGC ATCGACGCGG TCGAGGCCGA GTTGAGCAAG
TCGATCGAGC GCGGCTATTG CCAGAGTTTC GCCGACTACA GCCGCGACCT CGCCGGCGTC
GCGGTGCCGC TTCCGATCGG CGAGCGGCGG CTGTCGGTGG TGGTCGCCGG ACCGGAATTC
CGCATCGGCG ACCGGACCGC AGAGATCGCC GCGACGCTGA AGCAATTCGT CGAACGATTT
CGCGGCAAGT AA
 
Protein sequence
MIVRQAANVL EILEYFARVK KPATLAEIAD HFGWPRSSTF NLLTTLADKG YLYEPRPRAG 
YYPTPRWLVL AREVSEVEPL PAWSRALITS LSSETGETVA IAAPAGVMAV FIDVIESSAA
IRYFAHIGHR VPIHATSSGR ALLLQYSQDE RDSLYRKIEF KQYNPSTPIS IDAVEAELSK
SIERGYCQSF ADYSRDLAGV AVPLPIGERR LSVVVAGPEF RIGDRTAEIA ATLKQFVERF
RGK