Gene RPD_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0601 
Symbol 
ID4021070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp679249 
End bp679782 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID637960789 
Productresponse regulator receiver 
Protein accessionYP_567740 
Protein GI91975081 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGAGG AACGCTCGCT GATCGTCGTC GAGGACGACG CCGGATTCGC CCGCACGCTG 
AAGCGCTCGT TCGAGCGCCG CGGCTATGAG GTCGTGCACG CCTCAACCAT AGAAGACGTA
CGCGACGCGC TGGACGAGCG CTCATTCGGC TACGCCGTGG TCGATCTCAA GCTCGGCATC
GCATCGGGGC TCGCTTGCGT CGAACTGCTG CACGCGCAGG ACCCGGAAAT GCTGATCGTG
GTGCTGACTG GCTTTGCGAG CATCGCCACC GCGGTGGAGG CGATCAAGCT CGGCGCGTGT
CACTATCTCG CCAAGCCGTC GAACACCGAC GATATCGAGG CGGCATTCCG CAAGGCGGAA
GGCAATGCCG ACATCGCGCT GGGGAGCCAG CCGACCTCGT TCAAGACGCT GGAATGGGAA
CGCATCCATC AGACGCTGAT CGACAGCGAG TTCAACATTT CCGAAGCCGC GCGGCGTCTC
GGGATGCACC GCAGGACGCT GGCGCGCAAA CTCGAGAAGC GGCAAGTCAG ATAA
 
Protein sequence
MTEERSLIVV EDDAGFARTL KRSFERRGYE VVHASTIEDV RDALDERSFG YAVVDLKLGI 
ASGLACVELL HAQDPEMLIV VLTGFASIAT AVEAIKLGAC HYLAKPSNTD DIEAAFRKAE
GNADIALGSQ PTSFKTLEWE RIHQTLIDSE FNISEAARRL GMHRRTLARK LEKRQVR