| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0562 |
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| Symbol | |
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| ID | 4021030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 635304 |
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| End bp | 636251 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637960749 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_567701 |
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| Protein GI | 91975042 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.710301 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTTT CAAGGCGAAT TCTCGTGAGC GGCGGCGCCG GATTCATCGG CTCGCATCTG
TGCGACAGAC TGTTGGCCGA AGGCCACGAA GTCCTTTGCG TCGATAATTA CTTCACCGGC
TGGCGGCGCA ACATCGAGCA CCTCGTCGGC ACGCCGCGCT TCGAGGTGAT GCGCCACGAC
GTCACCTTCC CGCTTTATGT CGAGGTCGAC GACATCTACA ACCTCGCCTG CCCGGCCTCG
CCGGTGCATT ACCAGCACGA TCCGGTGCAG ACGCTGAAGA CCAGCGTGCA CGGCGCGATC
AACATGCTGG GGCTCGCCAA GCGCACCCGC GCGAAGATTT TCCAGGCCTC GACCAGCGAG
GTCTATGGCG ATCCGACCGT GCATCCGCAG CCGGAGAGCT ATTGGGGCCA CGTCAATCCG
CTCGGCATCC GCGCCTGCTA CGACGAAGGC AAGCGCGCCG CCGAGACGCT GTTCTTCGAT
TATCACCGCC AGCACAAGGT GAAGATCAAG GTGGCCCGGA TCTTCAACAC CTACGGCCCG
CGGATGCATC CGCGTGACGG CCGGGTGGTG TCGAATTTCA TCGTCCAGGC GCTGTCCGGC
GACGACATCA CGATCTACGG CGACGGCAGC CAGACCCGCT CGTTCTGCTA CGTCACCGAC
CTGCTCGACG GCTTTGCGAG ACTGATGGCG ACCGGCGACG GATTCATCGG CCCGGTCAAT
CTCGGCAATC CGGTCGAGTT CAGCATGCGC GAGCTCGCCG AGATGGTGAT CGCGATGACC
GACTCGAAAT CCAAACTGGT GTATCTGCCG CTGCCGTCGG ACGATCCGAA GCAGCGCCAG
CCCGACATCA CGCTGGCGCG GCGTGAACTC GGCTGGGAGC CGAAGGTGGC GCTGGCGGAC
GGGCTCAAGG AGACCATCGG CTATTTCCGC AAGCTGCTGG CGTCGTGA
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| Protein sequence | MRLSRRILVS GGAGFIGSHL CDRLLAEGHE VLCVDNYFTG WRRNIEHLVG TPRFEVMRHD
VTFPLYVEVD DIYNLACPAS PVHYQHDPVQ TLKTSVHGAI NMLGLAKRTR AKIFQASTSE
VYGDPTVHPQ PESYWGHVNP LGIRACYDEG KRAAETLFFD YHRQHKVKIK VARIFNTYGP
RMHPRDGRVV SNFIVQALSG DDITIYGDGS QTRSFCYVTD LLDGFARLMA TGDGFIGPVN
LGNPVEFSMR ELAEMVIAMT DSKSKLVYLP LPSDDPKQRQ PDITLARREL GWEPKVALAD
GLKETIGYFR KLLAS
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