| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0508 |
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| Symbol | rimM |
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| ID | 4020976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 580553 |
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| End bp | 581083 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637960695 |
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| Product | 16S rRNA-processing protein RimM |
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| Protein accession | YP_567647 |
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| Protein GI | 91974988 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGCCG GGCTGATCTG CATTGCCCGG ATCGGCGCGC CGCATGGCGT GCGCGGTGCA
ATGCGGCTGT GGAGCTTCAC CGCCGAGCCG CTCGCGGTGA TGGATTACGG CCCGCTCGCC
ACCAAGGACG GCGCGCGGTC GTTCGAGATC GCCACCGCGC GCCCGGCCAA GGACCATCTG
GTCGTGACGC TGAAGGGCGT CGCCACGCGC GAGGAGGCCG AACGCCTCAA CGGTCTCGAG
CTCTACGTCC CGCGCGATCG GCTGCCGCCG ACCGAGGATG GCGAGTACTA CCATGCCGAC
CTGATCGGCC TCCCCGCGAT CACGCCGGCC GGCGAACCGC TCGGCCGCGT GCTCGCGATC
CATAATTTCG GCGCTGGCGA CATCATCGAG ATCGCGCCGC CGCAGGGCGC GACCCTGCTG
CTGCCGTTCA CCAACGCGGT GGTGCCGACG GTCGACCTCA CGGCCGGCCA CGTCGTGATC
GAGCTGCCGA CCGAGATCGA GGGCGATACG CCCAACCATC CGGAGGCGTA A
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| Protein sequence | MPAGLICIAR IGAPHGVRGA MRLWSFTAEP LAVMDYGPLA TKDGARSFEI ATARPAKDHL
VVTLKGVATR EEAERLNGLE LYVPRDRLPP TEDGEYYHAD LIGLPAITPA GEPLGRVLAI
HNFGAGDIIE IAPPQGATLL LPFTNAVVPT VDLTAGHVVI ELPTEIEGDT PNHPEA
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