Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPD_0484 |
Symbol | |
ID | 4020952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB5 |
Kingdom | Bacteria |
Replicon accession | NC_007958 |
Strand | + |
Start bp | 558984 |
End bp | 559733 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637960671 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_567623 |
Protein GI | 91974964 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAAAA GCGGGAAACG CGTCGCCTGG ATCACCGGCG GGGGCAGCGG CATCGGCGAG GCCGGCGCGG AAGCGCTCGC CGCGGACGGC TTCACCGTGG TGGTCTCGGG ACGGCGGGCC GACGCGCTCG ACGCGGTGGT CGCGAAGATC AGGGCCCAAG GCGGCGCCGC CGAAGCGATC GCGCTCGACG TCAGCAGCTC CGATGCGGTG ATCGACGCCG CCGACAAGAT CCTCGCCGCG CATGGCCGCA TCGACTGTCT GGTCAATTCT GCCGGCATCA ACGTGCCGAA ACGCTCATGG GCCGACATGG AGCTCGACGG CTGGGACAAG CTCGTCGAGA TCAATCTCAA CGGCGTGCTG TATTGTATGC GCGCAGTGCT GCCGGCGATG CGCGCGCAAA AGGACGGCTG CATCATCAAC GTATCGTCCT GGGCCGGACG TCACGTCTCG AAGATGCCGG GCCCGGCCTA CACCACGACC AAGCACGCGG TGCTGGCGCT GACGCATTCG TTCAACATGG ACGAATGCGT CCATGGCCTG CGCGCCTGCT GCCTGATGCC GGCCGAAGTC GCCACGCCGA TCCTGAAGCT GCGGCCGGTG GTGCCGAGCG CCGAGGATCA GGCGCGGATG CTGCAGCCCG ACGACCTCGG CCGCACCATC GCCTTCGTCG CATCGATGCC GCCGCATGTC TGCGTCAACG AGATCCTGAT CAGCCCGACC TGGAACCGCT CCTTCGTCGG CGGGCTGTGA
|
Protein sequence | MTKSGKRVAW ITGGGSGIGE AGAEALAADG FTVVVSGRRA DALDAVVAKI RAQGGAAEAI ALDVSSSDAV IDAADKILAA HGRIDCLVNS AGINVPKRSW ADMELDGWDK LVEINLNGVL YCMRAVLPAM RAQKDGCIIN VSSWAGRHVS KMPGPAYTTT KHAVLALTHS FNMDECVHGL RACCLMPAEV ATPILKLRPV VPSAEDQARM LQPDDLGRTI AFVASMPPHV CVNEILISPT WNRSFVGGL
|
| |