| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0476 |
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| Symbol | |
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| ID | 4020944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 548928 |
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| End bp | 551021 |
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| Gene Length | 2094 bp |
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| Protein Length | 697 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637960663 |
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| Product | OmpA/MotB |
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| Protein accession | YP_567615 |
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| Protein GI | 91974956 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.66276 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.424488 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGAC TTCGACTAGC ATTGCTCGCC ACCACTGCAA TCACCCTCTG GCAAGCGGCG
AGCTTGCCGG CACGCGCCGA CACCGCGCTG ATGCTGATGG CGCAGGCCGC TCCGGCTCCG
GACAAGGGTG ACGAGAAAGA CCGCAAGGGT CCGCCGCCAG GCGAGCGCAA AGGTCCGCCT
CCGGGCGCCG CCCCGAGCCA GGCGCCGCCT CCCGCCGCAG CGCCTCAGCC GCGTCCCGCG
CCGCCCCCCG CTGCTGCCCC CGCACCCCGC GCCGAGCCGC CGGCCGCCCC GCGTGCGGAA
CCGCCGCCGC GTCCCGCTCC GCCGCCGGCG CCCCGTGCCG AACCCCCTGC AGCCCCACGC
GCTGCGCCGC CGCCGCCGCC GCCCGCGGCT GCACCGCCGC GCCCGCCCGC ACCCCCGGCT
GAAAAGAGCG CGCCGCGCGT CGAGCCGCCG GCACCCCCGC GTGCCGCTCC GCCGCCGCCT
CCGCCTGCCG CGGCTCCGCC AAAGCCATCC GCGCCACCCG CAGCCGACAA GGGAGCTGCC
CCGCCGCCCG CCGCGACTCC GCCAAGGCCG TCCGTGCCGC CCGCTGCCGA CAAGGGAGCA
GCCCCCACGC CGCCGCCCGC CGCGGCGCCG CAGCGACAGC CCGCGCCTGC CGACAGGCTC
GCGCCCGCCG ACAAGGGTGG AGCGCCGAGC CAGCGCCCGA CCCCGCCTGC GGCCGGCCAG
ATCGGCGCGC CACCGGCGGC CGGCTCGCCT CCGCCGGCTG CCCAGACTCC GCCCCCGGCA
GCCGGGCAGA CCAGTGCGCC GACAACGCCT CCGCCGGCCG GGCAACCGCC TGCCGCGCAG
ACCGGCGCAC CCGCTCAGCC CCCGGCGGGA CAGCCGCCGG CCGCTCAAAA GGACGTCACG
CCGCCGGCCG CCGGCCAGAT CGGCACGCCG ACGCCTGCCG CGCCGACGCC TGCGACCCCG
ACACAGCCGC CGGCCGGACA AACCACCGCG CCGGTTCCCG GCACGATCGG TCCGCAGGGC
GCGCAACCCG GCGCTGCCGG CGCTCTGCCG CCGGGCGCCC CGGTCGCACG CACGCCACCG
CCGACGGTGA CCGCGCCGAT CCCCGCCGCG CCGCCGCCCG CACAGGCGCT CACCCCGATC
GCCCCGGGCG CCGCGCCGCA AGGCCCGCGC AACATCACCG ACTTCCGCAG CGAACGCCGC
GAGGTCCAGC AAGGCGGCCG CACTGTGATC ACCGAGCCCG GTCGCATCAT CGTGCGCGAC
CCGAACGGGC AGGAGTTCAT CCGCCATAAC GAGATGGATC GGTTCCGCTA CGGCGCGCGC
AACATCCGGA CCGAGAAGAT CCGCGGCGGC GACACCCGCA CCATCGTGCT GCGTCCCGAT
GGCTCGGAGA TCATCAACGT GACCGGTGGC GACGGCCAGC TGCTCCGCCG TATCCGCCGC
GACCGCCAAG GCCGCGAGAT CATCATCATC GACAACAGCT TCGGTCCGCG TGACCGGGCG
AACTTCTACG TCGACCTGCC GCCGCCGGTG CTTCGTATGC CGCGCGACCG CTACATCGTC
GATTACGAGG ACGCCTCGCC GGAGCTGATC TACGAAACTC TCGACGCCCC GCCGGTAGAG
CGGATTCAGC GCCGCTACTC CATGGACGAG ATCCGCTACA GCCCGTCGGT GCGGCAGCGG
ATGCCCTCGA TCGATCTCAA CACGATCACG TTCGAGCTCG GTTCATGGGA CATTTCGCCG
GATCAGGCGT CCAAGCTGCA GGCGATCGCC GACGGTCTGA ACCGGTCGAT CTCGCGCAAC
CCGCGCGAGG TGTTCCTGAT CGAGGGCCAC ACCGACGCGA CCGGCAACGA CACCGACAAT
CTGTCGCTGT CGGACCGCCG CGCCGAATCC GCCGCCGCGC TGCTCACCCA GCAATTCGCG
GTGCCGGCCG AGAACCTGAC CTCGCAGGGT TATGGCGAGC AGTACCTCAA GGTGCAGTCC
GACGGACCGG AGCGGCAGAA CCGCCGCGTC ACCGTCCGCC GCATCACGCC GCTGCTGAAC
GGCGGTCAGG CCTCGCTGCC GCCGCCGCCC CCCGGCACCG CACCGCGGCG CTGA
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| Protein sequence | MRRLRLALLA TTAITLWQAA SLPARADTAL MLMAQAAPAP DKGDEKDRKG PPPGERKGPP
PGAAPSQAPP PAAAPQPRPA PPPAAAPAPR AEPPAAPRAE PPPRPAPPPA PRAEPPAAPR
AAPPPPPPAA APPRPPAPPA EKSAPRVEPP APPRAAPPPP PPAAAPPKPS APPAADKGAA
PPPAATPPRP SVPPAADKGA APTPPPAAAP QRQPAPADRL APADKGGAPS QRPTPPAAGQ
IGAPPAAGSP PPAAQTPPPA AGQTSAPTTP PPAGQPPAAQ TGAPAQPPAG QPPAAQKDVT
PPAAGQIGTP TPAAPTPATP TQPPAGQTTA PVPGTIGPQG AQPGAAGALP PGAPVARTPP
PTVTAPIPAA PPPAQALTPI APGAAPQGPR NITDFRSERR EVQQGGRTVI TEPGRIIVRD
PNGQEFIRHN EMDRFRYGAR NIRTEKIRGG DTRTIVLRPD GSEIINVTGG DGQLLRRIRR
DRQGREIIII DNSFGPRDRA NFYVDLPPPV LRMPRDRYIV DYEDASPELI YETLDAPPVE
RIQRRYSMDE IRYSPSVRQR MPSIDLNTIT FELGSWDISP DQASKLQAIA DGLNRSISRN
PREVFLIEGH TDATGNDTDN LSLSDRRAES AAALLTQQFA VPAENLTSQG YGEQYLKVQS
DGPERQNRRV TVRRITPLLN GGQASLPPPP PGTAPRR
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