Gene RPD_0461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0461 
Symbol 
ID4020928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp529350 
End bp530435 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content69% 
IMG OID637960647 
Producthypothetical protein 
Protein accessionYP_567600 
Protein GI91974941 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0578036 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCG AAGGAAAGTC CTATCCGTTC GATCATCTGC CGGCGATCGA CTACGACGCC 
CATCCGGCCT ATGGCCGCGT GATGTCGATG CCGATGCTCG GCGCCCGGCT GAAGGCGCTG
AGCATTTTCG GTTACGGCTT CCTGCTGACC TCGGCGCAGC GCGCCATCGA CGTCGAGCAC
CTGCCGCGCC CCGCCCAGGG CGGCAAACCT TTGATCACGG TGCTGCGCGG CCTGCCGACC
TATCTGCGCC TGATCCTGCT GCAGAGGCTC TCCCGCTTCA CCGCCGGCCG CGCCTATGCG
CCGAAAACCG AGCGCGGCAC GGCGGTGTTC GTGCCGCTTC AGGGCGACGG CTTCGCGGTG
GTCCGCCTCG GCAACGATGT GATCGCGCAG ATCCGCACGC AACTCGCCCC GCAACTGAAG
ACGCTGGAGC AGCGCGCAAC GCCGGCCGGC GATCCCGACA GCAGCCGGAT CTGGGTCGAT
CCCGTGTCGG CCCCGGATCT CTATCGCTGG TTCAACCAGA CCGCGGCCGA TCTCGGCCTG
ACCGAGGCCG CGAGCGCCTA TCTCAAGCGC CCGGTGGGCG TCGGCCACAT CGCCGCCGAA
GTCGTCGATG CGCCCGGCGC GCCGCCGGCC AGCCCGTTCG CCGATGTCGG CGTCGACGTC
TCGCCCTGCG ACGGCTTCAA GGTCGACCTC GGCTACAATG CGATGAAGCT GGTGATCTAT
CTCGACGAAG TCGGCCCGGC CAACGGCCCG CTGACCTATG TGGCCGGCAG CAACCGCGCC
GCGACGCGGT TCGGCGACGC GTTGATCCGC CGCGCCAACG ACCTCAGCGG CCTGTCGTCG
AGGCTGCAGG CCTGGCGCGA GACCTTCTAC GCGCTGCCTG CCGGCCTGCA GCGCAAAGCG
TCGTTCGGCG CCGATCTCGT CGCCGACAGC AACTTCGCCA CCGCGATCCA GAGCCATCAG
GTGGCGGTGA CGAGCAGCGA GGGCAACGCC GTGCTGTACG ATCCGGCCGG CATCCATCGC
GACGCGGCGC CGACGCAGGG CCGCCGCACC GCGGTGATCG TCAGGTTCAC CGAACTGTCG
CGCTGA
 
Protein sequence
MPPEGKSYPF DHLPAIDYDA HPAYGRVMSM PMLGARLKAL SIFGYGFLLT SAQRAIDVEH 
LPRPAQGGKP LITVLRGLPT YLRLILLQRL SRFTAGRAYA PKTERGTAVF VPLQGDGFAV
VRLGNDVIAQ IRTQLAPQLK TLEQRATPAG DPDSSRIWVD PVSAPDLYRW FNQTAADLGL
TEAASAYLKR PVGVGHIAAE VVDAPGAPPA SPFADVGVDV SPCDGFKVDL GYNAMKLVIY
LDEVGPANGP LTYVAGSNRA ATRFGDALIR RANDLSGLSS RLQAWRETFY ALPAGLQRKA
SFGADLVADS NFATAIQSHQ VAVTSSEGNA VLYDPAGIHR DAAPTQGRRT AVIVRFTELS
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