Gene RPD_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0426 
Symbol 
ID4020892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp489574 
End bp490413 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content63% 
IMG OID637960611 
Producthypothetical protein 
Protein accessionYP_567565 
Protein GI91974906 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCG ACGGCAGCTA TTTTCACCTC CATCTGGTGT CCGATTCGAC CGGCGAAACC 
CTGATCACGG TGTCCCGCGC GGTCGCCGCG CAATACGCCA ACGTCTCTCC GGTGGAGCAT
GTCTATCCGC TGGTGCGAAG CCAGAAGCAG CTCGATCGCG TGCTGCAGGA GATCGAGGAA
TCGCCCGGCA TCGTGCTTTT CACGCTGCTG GAAAGCGAGC TGGTCAACCG GCTGGAGGCC
AAGTGCCAGC AGATCAACAG CCCGAGTCTG TCGATCATCG GCCCGGTGAT GCAATTGTTC
GAGGCCTATC TCGGCGCCTC CACCACCGGC CGGGTCGGCG CGCAGCACAC TTTGAACGCC
GAATATTTCA AGCGCATCGA CGCGCTGAAC TACTCGATGA TGCATGACGA CGGCCAGCAT
GTCGAAGGCC TGGAAGAGGC CGATGTGGTG CTGGTCGGGG TGTCGCGCAC CTCGAAGACG
CCGACCTCGA TCTATCTCGC CAATCGCGGG ATCCGCACCG CCAACGTGCC GCTCGTCGCC
GGCATTCCGA TTCCGCATCA GCTCGAGACG TTGAAGAAGC CACTGGTGGT CAGCCTCCAC
GCCTCGCCGG ACCGGCTGAT CCAGGTCCGA CAGAATCGGT TGCTCAGCCT GGGCGCTGGC
GCCGGCAACG ACTCCTATAT CGATCGCCAG GCGGTCACCG ACGAAGTGCT GCTGGCCCGC
AAGCTCAGCG CCAAATACGG CTGGTCGCTG CTCGACGTCA CCCGACGATC GATCGAGGAA
ACCGCCGCTG CGATCATGAA GCTGCTCGCC GACCGCCAAC GCCAGAGGAT GTCCGAATGA
 
Protein sequence
MLTDGSYFHL HLVSDSTGET LITVSRAVAA QYANVSPVEH VYPLVRSQKQ LDRVLQEIEE 
SPGIVLFTLL ESELVNRLEA KCQQINSPSL SIIGPVMQLF EAYLGASTTG RVGAQHTLNA
EYFKRIDALN YSMMHDDGQH VEGLEEADVV LVGVSRTSKT PTSIYLANRG IRTANVPLVA
GIPIPHQLET LKKPLVVSLH ASPDRLIQVR QNRLLSLGAG AGNDSYIDRQ AVTDEVLLAR
KLSAKYGWSL LDVTRRSIEE TAAAIMKLLA DRQRQRMSE