Gene RPD_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0410 
SymbolhisE 
ID4020876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp477185 
End bp477508 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content66% 
IMG OID637960595 
Productphosphoribosyl-ATP pyrophosphatase 
Protein accessionYP_567549 
Protein GI91974890 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTT TCACCCTTCA CGATCTCGCA GCCACCATCG ACGCGCGTGC TGCGTCGGGC 
GGCGAGGCGT CCTACACCAA GAAGCTGCTC GACAAGGGCG CCGAGCACTG CGCCAAGAAA
TTCGGCGAGG AGGCGGTCGA GCTGGTGATC GCGACGGTCG AGAACGACCG CGGCCATCTC
ATTGCCGAGG CAGCCGACGT GCTGTTCCAC ATGCTGGTGC TGCTGAAGGC GCGCGGCGTG
AAGCTCGACG AGGTCGAGGC GGCGCTGGCG CAGCGCACCT CGATGTCCGG TCTCGAAGAA
AAAGCCTCCC GCAAGCGCGA TTAG
 
Protein sequence
MARFTLHDLA ATIDARAASG GEASYTKKLL DKGAEHCAKK FGEEAVELVI ATVENDRGHL 
IAEAADVLFH MLVLLKARGV KLDEVEAALA QRTSMSGLEE KASRKRD