| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0317 |
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| Symbol | ispG |
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| ID | 4020776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 365780 |
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| End bp | 367105 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637960495 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_567456 |
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| Protein GI | 91974797 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAAA AACCTGATAT TCCGGACGCC ATGAACAAGC TCGAAAATCC GCTGCAGAAC
GACGTCGCCG GCCCCGCGCC GCGCCGCCAA ACCACCCAGG TCATGGTCGG CGATGTCGCC
GTCGGCGGCG GTGCGCCGAT CGTCGTGCAA TCGATGACCA ACACCGACAC CGCGGATGTC
GAAGGCACCA TCAAGCAGGT CGCCGCACTC GCCCGCGCCG GTTCCGAAAT GGTCCGGATC
ACCGTCGACC GCGAAGAGGC CGCCGCAGCC GTGCCGCACA TCCGCGACGG CCTCCGCAAG
CTCGGCCTGA CCACGCCGCT GATCGGCGAT TTCCATTACA TCGGCCACAA GCTGCTCGCC
GACTATCCGG CCTGCGCCGA GGCGCTCGAC AAATACCGGA TCAATCCGGG CAATGTCGGC
TTCAAGAACA AGCGCGACAG CCAGTTCACC GACATCGTCG AGATTGCGAT CAAGAACAAC
AAGGCGGTCC GGATAGGCGC CAATTGGGGC TCGCTCGACC AGGAGCTGCT GACCAAGCTG
ATGGACGAGA ACGCCGCCTC CGCCCAGCCG CGCGACGTCC GCGCGGTCAC CCGCGAGGCG
ATGGTGCAGT CGGCGCTGCT GTCGGCGGCG CGCGCCGAGG AGATCGGCCT GCCGAAGACC
AAGATGATCC TGTCGGCCAA GGTCTCGGCG GTGCAGGATC TGATCGCGGT GTATCAGGAC
CTCGCGTCGC GCTCGGACTA CGCCATCCAT CTCGGCCTGA CCGAGGCCGG CATGGGCTCG
AAGGGCATCG TCGCCTCCTC GGCCGCGCTC GGCATCCTGC TGCAGCAGGG CATCGGCGAC
ACCATCCGGA TTTCGCTCAC GCCGGAGCCC GGCGGCGATC GCACGCTGGA AGTTCAGGTC
GCGCAGGAAC TGCTGCAGAC GATGGGCTTC CGCACCTTCG TGCCGCTGGT CGCGGCTTGC
CCGGGCTGCG GCCGCACCAC CTCGACGACG TTCCAGGAAC TGGCCCGCTC GATCCAGGAT
TTCATCCGGC TGGAAATGCC CAGCTGGAAG ACCCGCTATC CTGGCGTCGA GAACCTCAAC
GTCGCGGTGA TGGGCTGCAT CGTCAACGGC CCGGGCGAGA GCAAGCACGC CAATATCGGC
ATCTCGCTGC CCGGCACCGG CGAAAGCCCG GCCGCCCCGG TGTTCGTCGA CGGCCAGAAG
TTCCGCACTC TGCGCGGCCC GTCGATCGCC ACCGATTTCA AGGCGCTGGT GATCGACTAT
ATCGAGCAGC GCTACGGCGC GGGCACCAAG CCCGGCGCGC CGCAAATGGT GCCGGCGGCG
GAGTAA
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| Protein sequence | MSQKPDIPDA MNKLENPLQN DVAGPAPRRQ TTQVMVGDVA VGGGAPIVVQ SMTNTDTADV
EGTIKQVAAL ARAGSEMVRI TVDREEAAAA VPHIRDGLRK LGLTTPLIGD FHYIGHKLLA
DYPACAEALD KYRINPGNVG FKNKRDSQFT DIVEIAIKNN KAVRIGANWG SLDQELLTKL
MDENAASAQP RDVRAVTREA MVQSALLSAA RAEEIGLPKT KMILSAKVSA VQDLIAVYQD
LASRSDYAIH LGLTEAGMGS KGIVASSAAL GILLQQGIGD TIRISLTPEP GGDRTLEVQV
AQELLQTMGF RTFVPLVAAC PGCGRTTSTT FQELARSIQD FIRLEMPSWK TRYPGVENLN
VAVMGCIVNG PGESKHANIG ISLPGTGESP AAPVFVDGQK FRTLRGPSIA TDFKALVIDY
IEQRYGAGTK PGAPQMVPAA E
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