Gene RPD_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0304 
Symbol 
ID4020763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp352495 
End bp353367 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID637960482 
Producthypothetical protein 
Protein accessionYP_567443 
Protein GI91974784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.219486 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.268304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACGC CGCGCGCCGC CACCTTGATC GGCCTGTCCG CGATCCTGAT GTGGTCGCTG 
CTCGCGGTGC TGACCGTGGC GACCGGGACC ATCCCGCCGT TTCAGCTCGC CGCGATGACC
TTCGCGATCG GCGCGCTCGC CGCGGCGACC GGATGGATCC TGCGGCCCGG CGCGATCCGC
GCGCTGCGTC AGCCGCCGCT GGTGTGGGCG GTCGGCGTCG GCGGCTTGTT CGGCTATCAC
GCGTTGTATT TTCTCGCGCT ACGCCTCGCG CCGCCCGCCG AGGCCGGGCT GCTGAACTAT
CTGTGGCCGT TGCTGATCGT GTTGTTCTCG TCGCTGCTGC CGGGCGAGCG CCTGCGGCCG
CATCACATCG CCGGCGCGCT GCTCGGTCTG GTCGGCACCG CTCTGCTGTT CACCGGCAAC
GGGGCTGCGC TGGAGCCGGC CTATCTGCCC GGACTCGCCG CGGCCTTCGT CGCCGCCTTC
GTGTGGGCCG CCTATTCGGT GCTGTCGCGG CGGCTGAAGG CGGTGCCGAC CGATGCGGTC
GCGGGATTCT GCTTCGTCAC CGCGCTGCTC GCTGCGCTGG TGCACGGCGT GATCGAATCG
ACGGTGTGGC CGCAAGGCGC GGCGCAATGG CTCGCGATCG TCGCGCTCGG CATCGGCCCG
GTCGGCGCGG CGTTCTACGC CTGGGACATC GGCATGAAGC GTGGCGACAT TCGCGTGCTG
GGCGCTGCGT CCTACGCGAC GCCGCTGCTC TCCACCGGCT TTCTGATCAT CGCGGGATAC
GCGCAGCCGA CCGCCACGCT GGCGCTGGCG GCGTTGCTGA TCGCCGGCGG CGGACTGCTC
GCCGCGAGAG ACATGCTGCG CGGCGGTAAG TAA
 
Protein sequence
MMTPRAATLI GLSAILMWSL LAVLTVATGT IPPFQLAAMT FAIGALAAAT GWILRPGAIR 
ALRQPPLVWA VGVGGLFGYH ALYFLALRLA PPAEAGLLNY LWPLLIVLFS SLLPGERLRP
HHIAGALLGL VGTALLFTGN GAALEPAYLP GLAAAFVAAF VWAAYSVLSR RLKAVPTDAV
AGFCFVTALL AALVHGVIES TVWPQGAAQW LAIVALGIGP VGAAFYAWDI GMKRGDIRVL
GAASYATPLL STGFLIIAGY AQPTATLALA ALLIAGGGLL AARDMLRGGK