| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0281 |
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| Symbol | |
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| ID | 4020740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 321188 |
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| End bp | 324547 |
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| Gene Length | 3360 bp |
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| Protein Length | 1119 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960461 |
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| Product | helicase-like |
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| Protein accession | YP_567422 |
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| Protein GI | 91974763 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.288418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGAT CATTCTCCGC GCCGTTTACC AATGACCGGG CGCCGGGCGC CGGCGTCACC
GCGGTGCTCG GCCCGACCAA TACCGGCAAG ACCCATCTGG CGATCGAACG GATGGTGGCG
CATCCCTCCG GGCTGATCGG CCTGCCGCTG CGGCTGTTGG CCCGCGAGGT CTATAACAAG
ATCGTCGATC GGGTCGGTCC GGACGCGGTG GCGCTGGTCA CCGGCGAGGA GAAGATCAAG
CCGCCGAAGG CGCGGTTCTG GGTCTCGACC GTCGAGGCGA TGCCGCGCGA TCTCGACGTC
TCGTTCCTGG CGGTGGACGA GGTGCAGATT GCCGCCGATC TCGAGCGCGG TCATGTCTTC
ACCGATCGTC TCCTGCGCCG CCGCGGTCGC GACGAAACGC TGCTGCTCGG CGCTGCGACG
ATGCGGCCGA TCATCGAACG GCTGCTGCCG GGCGCCAGCA TCGTCACCCG GCCGCGGCTG
TCGCAGCTCG AATTCGCCGG CGACCGCAAG CTGACGCGGC AGCCGCGCCG CACCGCGATC
GTCGCGTTCT CGGCCGACGA GGTCTACGCC ATCGCCGAGT TGATCAAGCG CCAGCACGGC
GGCGCTGCGG TGGTGCTGGG TTCGCTGTCG CCGCGCACCC GCAATGCCCA GGTGGCGATG
TTCCAGTCGG GCGACGTCGA TTATCTGGTC GCCACCGACG CGATCGGCAT GGGGCTCAAC
CTCGATGTCG ATCACGTCGC GTTCGCCTCC GACCGTAAAT TCGACGGCTA CCAGTTTCGA
AGGCTCAACC CGTCGGAATT CGCCCAGATC GCCGGCCGCG CCGGTCGCGC CACCCGCGAT
GGCACCTTCG GCACCACCGG GCGCTGCGCG CCGTTCGAGC CCGAACTGGT CAATGCACTG
CAAAATCATA CCTTTGACGC GGTAAAGACG CTACAATGGC GGAATTCCGA GCTCGATTTC
GCCTCGATCG CCGCGCTGCA GGTGTCGCTG GCCGAGACGC CGCGGCACGA TGCGCTGACC
CGCGCGCCGG CCGCCGAGGA TCTGCGGGTG CTCGACCATG CCGCCCGCGA CGGCGATGTG
CGCGACATGG CGCATGGCGC GGCAGCGGTG GAGCGGCTAT GGGAGGTCTG TCAGGTCCCG
GATTATCGCA AGATCGCGCC GGCGGCCCAC GCCGAATTGG TAACGACGCT GTATCGCTTT
TTGATGCAGA AAGGCCGGAT TCCGGATGAC TGGTTCGGCG CCCAGGTCGA GCAGGCCGAC
CGGATCGATG GCGGCATCGA TACGCTTTCG GCACGGATCG CGCAGATCCG GACATGGACT
TTCGTAGCCA ACCGGGTCGA CTGGTTGGCC GATCCTGAAC ACTGGCAAGG CATTTCACGC
GACATCGAAA ATAAATTGTC AGATGCGTTG CACGAACGCC TCACGGAGCG TTTCGTAGAT
CGTCGGACCA GTGTATTGAT GCGCCGCCTG CGGGAAAACA CGATGTTGAA TACGGAAATT
GGTAAGACCG GCGAAGTGAT CGTCGAGGGA CATGTGATCG GTCGTCTCGA CGGCTTCACA
TTTGCACCCG ACGCAGCCGA AGCTGGCTCT GATGCGAAGG CCTTGCAGGC GACTGCGCAG
AAGGCTCTGG CGGGCGAAAT CGACTCCCGT GCCGAGAAGC TCTCCGGCGC GCCCGACGAG
CAGTTTCTGC TGACCTCGGA CGGCACCGTG CGCTGGACCG GCGACGCGGT GGGGCGGCTG
GTCGGCTCCG ACGAGGTGCT GCGGCCGCGG CTGCGCATCA TTGCCGACGA TCGTCTGGCC
GGCGCATCGC GCGAAGCAGT GCAAACCCGG CTCGATCTCT GGCTCAAGAC CCATATCGAG
AAGATTCTCG GACCGCTGTT CGAGCTGTCC AAGGCCGAGG ATATCACCGG CATCGGCCGC
GGCATCGCCT TCCAGTTGAT CGAGTCGCTG GGCGTGATCG AACGCGCCAA GATCGCGGCC
GAGATGAAGG ACCTCGACCA GCCGTCGCGG GCGACGCTGC GCAAATACGG CGTGCGGTTC
GGCGCCTATC ACATCTATGT CCCATCGCTG CTGAAGCCGG CGGCGCGTGC GCTCGCCTCG
CTGCTCTGGG CGCAGAAGCT GGACGATGTC GACATGTCGG CGCTGTCCAG CGCGCAGCAT
CTCGCCAGCA GCGGCCGCAC CTCATTCCCC GCCGACAAGG CGCTCGATCG CGACGCCTAC
CGCACGCTCG GTTACCGGCT GTGCGGCGAG CGCGCCGTGC GCGTCGATAT CCTTGAGCGG
CTTGCCGATC TGATCCGCCC GGCGCTGGCC TGGCGCGAAG GCGCCCAAGG CGAGAAGCCG
GCGGGCGCGT TCGACGGCCG CAGCTTCGTC GTCACCCAGT CGATGACCTC GCTGACCGGC
TCCGCCGGCG AAGACTTCGC CTCGATTCTG CGCGCGCTCG GCTATCGCAT GGAGAAGCGG
CCGGCGCTGC CGCCGTCGAC CACTGCGCCG GCAAAGTTGC CGGACGCTGC GCCCGAGGCT
CCCTCGGCTG ATTCGGCCGA AACCGGCTTG TCGGCCGAAG ATCACGCCAT TCTTGCCGGC
GCGATTGCGT TTGAGCCGGC GGTTGCTGCC GAGACCGACG ACGTCGCTGA CCTGACGAAT
GATGCGCCGC AGCCTGTTGC GGCGAGCGAA CAAGCCGCGC CGGAGCCGGC AGCAGACGCG
TCGGAATCGT CGCCGGTGGA ATCGCAGCCG GATTCGGCCG CCGTGCCGGA GGCGGAGCTT
GCTGCGACCG ACACAGCGCA GGAGGCAACT GCCGAAGCGG CTGCATCCGA TGCGCCGGCC
GTCGACGCCA CCACCGACAA TACGGACGGC GCTGCGCCGG CTGTCGAGAG TGCCGCACCC
GCTCAGCCCG AGATGGTCGA GGTCTGGCGT CCGGGTGGCC GCTCGGACGA GCATCGCGCC
CGGCCTGATC GCAATCGTCA GCGCCATCGT CCGCCGCAGG CCGGCCAGGC CGCTGCGCCG
GAAGGCGAAG CCGGCGAGGC CAAGCGCGGC GATCGTCCGG ATCGTGGCGG GCGGCGGGGT
GACCGCAAGG GCGCCGATGT TCGCCGCGAC CGCCGCGAGG GCGAGGGGCA AGGTGCGCCG
CGCAGTGAGG CTGCCGGCGA GGGGCGTCCG TCCCGCGAAC GCTTCAAGGG TCGCGACAAG
TCCCAGGACA AGTTCAAGGG CGGGCCGAAG GGCGGCCGCG ACAACCAGGG CGGCGGATCG
CATCGGCAGG TGCATTCCAG CGCGCCGCCG CGCGAGCGCG ATCGGCCGAT CGATCCGAAC
TCCCCGTTCG CGAAGCTCGC GGCGCTCAAG GAGCAACTCT CCGCCGGCCG CAAGGACTAA
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| Protein sequence | MPRSFSAPFT NDRAPGAGVT AVLGPTNTGK THLAIERMVA HPSGLIGLPL RLLAREVYNK
IVDRVGPDAV ALVTGEEKIK PPKARFWVST VEAMPRDLDV SFLAVDEVQI AADLERGHVF
TDRLLRRRGR DETLLLGAAT MRPIIERLLP GASIVTRPRL SQLEFAGDRK LTRQPRRTAI
VAFSADEVYA IAELIKRQHG GAAVVLGSLS PRTRNAQVAM FQSGDVDYLV ATDAIGMGLN
LDVDHVAFAS DRKFDGYQFR RLNPSEFAQI AGRAGRATRD GTFGTTGRCA PFEPELVNAL
QNHTFDAVKT LQWRNSELDF ASIAALQVSL AETPRHDALT RAPAAEDLRV LDHAARDGDV
RDMAHGAAAV ERLWEVCQVP DYRKIAPAAH AELVTTLYRF LMQKGRIPDD WFGAQVEQAD
RIDGGIDTLS ARIAQIRTWT FVANRVDWLA DPEHWQGISR DIENKLSDAL HERLTERFVD
RRTSVLMRRL RENTMLNTEI GKTGEVIVEG HVIGRLDGFT FAPDAAEAGS DAKALQATAQ
KALAGEIDSR AEKLSGAPDE QFLLTSDGTV RWTGDAVGRL VGSDEVLRPR LRIIADDRLA
GASREAVQTR LDLWLKTHIE KILGPLFELS KAEDITGIGR GIAFQLIESL GVIERAKIAA
EMKDLDQPSR ATLRKYGVRF GAYHIYVPSL LKPAARALAS LLWAQKLDDV DMSALSSAQH
LASSGRTSFP ADKALDRDAY RTLGYRLCGE RAVRVDILER LADLIRPALA WREGAQGEKP
AGAFDGRSFV VTQSMTSLTG SAGEDFASIL RALGYRMEKR PALPPSTTAP AKLPDAAPEA
PSADSAETGL SAEDHAILAG AIAFEPAVAA ETDDVADLTN DAPQPVAASE QAAPEPAADA
SESSPVESQP DSAAVPEAEL AATDTAQEAT AEAAASDAPA VDATTDNTDG AAPAVESAAP
AQPEMVEVWR PGGRSDEHRA RPDRNRQRHR PPQAGQAAAP EGEAGEAKRG DRPDRGGRRG
DRKGADVRRD RREGEGQGAP RSEAAGEGRP SRERFKGRDK SQDKFKGGPK GGRDNQGGGS
HRQVHSSAPP RERDRPIDPN SPFAKLAALK EQLSAGRKD
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