Gene RPD_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPD_0272 
Symbol 
ID4020731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB5 
KingdomBacteria 
Replicon accessionNC_007958 
Strand
Start bp312486 
End bp313292 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content68% 
IMG OID637960452 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_567413 
Protein GI91974754 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.342358 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACT ACACGGATAT CGCCGTCGAG ACCAACGGCC ACGTCGCCCT GATCGAGATC 
CGGCGCCCGC CGCTGAATTT CTTCGACATT TCGCTGATCC AGCAGATCGC CGACGCGCTC
GACGCCATCG ACGCCGATCC GGAGATGCGC GCCACGGTGC TGGCCGCGCA GGGCAAGGCG
TTCTGCGCCG GGGCCAATTT CGGCGATTCG GCGCAGCAGG CCGGCGATCC GCAAGCGGCG
AAAGGCGATC CGGCCGACAG CCTCGGCCAG ATCGGCCACC TCTACTACGA GGCGGTGCGG
ATCTTCCGCG CCAAGAAGCC GATCGTCGCC GCGGTGCACG GCGCTGCGAT CGGCGGCGGG
CTCGGCCTCG CGGTGTCGGC GGATTTCCGC GTCACCTGCC CCGAAGCGCG GTTCGCGGCG
AACTTCACCA AGCTCGGCTT TCATCCCGGC TTCGGTCTGA CGGTGACGCT GCCGGAGCTG
ATCGGCCGCA ACAATGCCGA GCTGATGTTC TACACTTCGC GCCGGGTCAC CGGCGAAGAC
GCGGTGAAGA TGGGCCTCGC CAACGAGCTG GTGCCGCTCA ACGAAGTCCG CAGCGCCGCG
CTCAAGCTCG CGCGTGAGAT CGCCGAATGC GCGCCGCTCG GCCTGCTCTC GACCCGCGCG
ACGATGCGCG CCACGCTCGC CGACCGGGTG ATGGAAGCGA CGAAGCACGA ACTCGCCGAA
CAGACGCGGC TGCGCGCGAC CGAAGATTTC AGGGAAGGCA TCAAGGCCAC CGAAGAACGC
CGCATCGCGC ACTTCAAGGG GCGCTAA
 
Protein sequence
MTNYTDIAVE TNGHVALIEI RRPPLNFFDI SLIQQIADAL DAIDADPEMR ATVLAAQGKA 
FCAGANFGDS AQQAGDPQAA KGDPADSLGQ IGHLYYEAVR IFRAKKPIVA AVHGAAIGGG
LGLAVSADFR VTCPEARFAA NFTKLGFHPG FGLTVTLPEL IGRNNAELMF YTSRRVTGED
AVKMGLANEL VPLNEVRSAA LKLAREIAEC APLGLLSTRA TMRATLADRV MEATKHELAE
QTRLRATEDF REGIKATEER RIAHFKGR