| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0269 |
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| Symbol | |
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| ID | 4020728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 309048 |
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| End bp | 309830 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637960449 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_567410 |
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| Protein GI | 91974751 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.722352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGG CTGGATTGAA TGTGATCGTG ACAGGGTCGG CGTCCGGCCT CGGCGCTGCG
ACGGCGAAGA TCCTGGCGCG GGACGGCGCG CGGCTCGTGA TCAATTATTC GTCCAGCCAG
AAAGACGCCG AGACGACCGC CGAGGATTGC CGCAAGGCCG GCGCAGCCGA GGTGGTGGTG
GTGCAGGGCG ACGTCGCCAA AGACGACGAT TGCAAGCGTA TCGTCGAAGC CGCCGCGCAT
TGGGGCGGGC TCGACGCGCT GATCAACAAT GCCGGCATCA CCAAGCATGT CGCGCATCAC
CTGCTCGATC AGTTATCGGC GGAGGATTTC CAGCGGATCT ATGCGGTGAA CACCATCGGC
CCGTATCAGA TGGTGCGCGC CGCGCGCGCG CTGCTCGTGG CCGGCGCGAA AGCCGCGGGC
CGTTCGTCGG CGGTGGTCAA CGTATCGTCG GTCGCCGGCA CCAGCGGCAT CGGCTCCTCG
ATCGCCTATG CGGCCAGCAA GGGCGCGCTG AACACCATGA CGTTGTCGCT CTCGCGCGCG
CTGGCGCCCT CGATCCGCGT CAACGCGATC TGCCCGGGTT ACATCGACAC GCCATGGTTC
ACCAAGGGTC GCGGCGCCGA TGCCGCGCAG CAGGTACGCG ACATGGTGGT CGCCAAGGTG
CCGCTGAAGA TCGCGTCGAG CCCGGAGGAT ATCGCCGAAC TGGTGTGCTT CCTCGCATCG
CCGAAATCCA GCAGCATGAC CGGCGAGCTG GTCCGGATGG ACGCCGGTAT GCATCTCGGC
TGA
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| Protein sequence | MAKAGLNVIV TGSASGLGAA TAKILARDGA RLVINYSSSQ KDAETTAEDC RKAGAAEVVV
VQGDVAKDDD CKRIVEAAAH WGGLDALINN AGITKHVAHH LLDQLSAEDF QRIYAVNTIG
PYQMVRAARA LLVAGAKAAG RSSAVVNVSS VAGTSGIGSS IAYAASKGAL NTMTLSLSRA
LAPSIRVNAI CPGYIDTPWF TKGRGADAAQ QVRDMVVAKV PLKIASSPED IAELVCFLAS
PKSSSMTGEL VRMDAGMHLG
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