| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0263 |
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| Symbol | |
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| ID | 4020721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | + |
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| Start bp | 303023 |
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| End bp | 304009 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637960442 |
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| Product | hypothetical protein |
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| Protein accession | YP_567404 |
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| Protein GI | 91974745 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.744108 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCAAC TGCAGGATTT TCGAACCGGG AAGCCGGCCT TCTATCCCGA TCAGGCGATC
TACGCCGAAT ATGCCTGCGC GCGGCTCGGC CTCCGCTTCA GCGAACGCGA CGGCGGCACC
GGCCTGTTGT TCGCCGTCGC CTCGGGGACG AAGGAAATCT GCTTCGGCGG CGGGCGTTGC
TCGTATTATC CGCAGAACAA CGCCACCGCA GCATCGCTCG CGACCGACAA ATATCTCGCC
AATGCGCTGC TGGAACGCGC CGGCGTGGCG ACGCTCGGCG GCCGCTATTT CTTCCTGCAC
GACCGCCACC GCGCGCTGCG ACCGCCCGGG CACGAACGCA AAGATGCGCT TGACTATCTC
GCAGCGCAGG GCGGCCACGC CTTCGCCAAG CCGCTCACCG GCTCGCGCGG CGACTTTGCG
CGGCCGATCG AGAGCGCCGC GGCGCTGGCC TCCTATCTCG ACGATGTCGC GCGCTATTAC
GATTCCGTGC TGATCCAGCC CTATGCCTCA GGCCACGAGT ATCGCGTGTT CGTGGTCGAC
GGCGAAGCGC TGTACACCGC GCGAAAGCTG CCGCCGGCGG TGATCGGCGA CGGCGTCCGC
AGCCTGCGTG AGCTGCTGCA CGAACACGAC CGCGCGTTGC GCGACCGCGG ATTGTCGGGC
GCGAGCGGCG ACGATCCGTC GCTCGATCAG GTGCCCGCGG CCGGCGAGCG GCGCGACATC
GCGGGCCGGA TGAATCTCAG CGTCGGCGGC GCGATGGTGA TGGAGGAGGC CGGCGCGCCG
GCGATCGCAG GCGCCCGAGC CGCGACGCGC GCGCTCGGCC TGCGGCTCGG CGCGGTCGAT
CTGTTCGTCG ATCCGGACGC GCGCGACGAC GTGCGGGTGA TCGAGGTGAA TTCCAATCCC
GCGATCCGCT TTCTCGAAAG CTGCGGCCGC GACGATCTGA TCGTCGCGAT CTGGCGTCAC
AGTCTCACCG CAGCAGGATT GTTGTAG
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| Protein sequence | MPQLQDFRTG KPAFYPDQAI YAEYACARLG LRFSERDGGT GLLFAVASGT KEICFGGGRC
SYYPQNNATA ASLATDKYLA NALLERAGVA TLGGRYFFLH DRHRALRPPG HERKDALDYL
AAQGGHAFAK PLTGSRGDFA RPIESAAALA SYLDDVARYY DSVLIQPYAS GHEYRVFVVD
GEALYTARKL PPAVIGDGVR SLRELLHEHD RALRDRGLSG ASGDDPSLDQ VPAAGERRDI
AGRMNLSVGG AMVMEEAGAP AIAGARAATR ALGLRLGAVD LFVDPDARDD VRVIEVNSNP
AIRFLESCGR DDLIVAIWRH SLTAAGLL
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