Gene RPC_4929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4929 
Symbol 
ID3973846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5499611 
End bp5501473 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content65% 
IMG OID637928042 
Productheat shock protein 90 
Protein accessionYP_534770 
Protein GI90426400 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.621243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CCGATACCGC CCCCCAGTCC CAGCCGTTCC AGGCCGAAGT CGCCGAGCTC 
TTGAACCTGA TGGTGCACTC GGTCTATTCG GAAACCGACA TCTTCCTGCG CGAACTGATT
TCCAACGCCT CCGACGCGCT CGACAAGCTG CGCTACGAGT CGATTGCCAA GCCCGAGCTG
ATGGCCGACG GCGGCGAGCC GAAGATCCGG ATCTTGCCGA AGAAGGAGCC CGACACGCTG
AGCGTGATCG ATAACGGCCT CGGCATGGAC CGCCAGGAAT TGATCGACAA TCTCGGCACC
ATCGCCAAGT CCGGCACCAA ATCGTTTCTG ACCAAGCTGA CCGAAGCCAA GGACGGCGCC
GGCCTGATCG GCCAGTTCGG CGTCGGCTTC TACGCCGCCT TCATGGTCGC CGACCGCATC
GTCGTCACCA GCCGCCGCGC CCGCTCGGCC GAGGCCTGGA CCTGGTCGTC GTCGGGCGGC
GCCGGCTTCG AGATCGCGCC GGCCAGCGAG GAAGACGCAG CCCGCGTGAC CCGCGGCACC
GAGATCGTGC TGCACCTGAA GAAGGATGCC GCGAAGTATC TCGAACCTTA TGAGATCGAG
CGCGTGGTCG GCGCTTACTC CGATAACATC CAGTTCCCGA TCGAACTGGT GCCGGAAGAG
GGCGAGCCGC GGCAGATCAA TTCGGCCAGC GCGCTGTGGC AGCGCTCGAA ATCCGAACTG
ACGGCGGAAG ACTATTCGCA GGCCTACAAG CAGATCGCTG GCGCCTTCGA CGAGCCGGCG
ATGACGCTGC ACTACCGCGC CGAGGGTCGC TACTCCTATG CGGTGCTGCT GTTCGCGCCG
TCGACCAAGC CGTTCGACCT GTTCGAGCCG GCGCGCAAGG GTCGCGTCAA GCTCTACGTC
CGCCGCGTCT TCATCACCGA CGAGGCCGAC CTGTTGCCGT CCTATCTGCG CTTCATCCGC
GGCGTGATCG ATAGCGAAGA TTTGCCGCTC AATCTGTCGC GCGAGATGCT GCAGAACAAT
CCGCAGCTGG CGCAGATCCG CAAGGCGGTG ACCGGCAAGG TGATCGGCGA ATTGGAAAGC
CTCGGCGACA AGGATCCGGA GGCGTTCGGC AAGATCTGGG ACGCCTTCGG CCTGGTGATC
AAGGAAGGCA TCTGGGAAGA CTATGAGCGC CGCGACAAGC TATTGGCGCT ATCGCGCTTC
ACCACCACCA AGGGCGAGAA CCGCACGCTG AAGCAGTATG TCGAGGATCT GAAAGAGAAC
CAGACCGAGA TCTACTATCT GGTCGGCGAC TCGATCGAGC GGCTGAAGTC CAACCCGAAA
CTGGAATCGG CCGCGGCGCG CGGCATCGAA GTCCTGCTGC TGACCGATCC GGTCGACGCG
TTCTGGACCT CGGCGCCGCT GGATTTCGGC GGCAAGCCGC TGAAGTCGCT GAGCCAGGGC
GACGTCGATT TCGGCCAGAT CCCGACCACC GAGGAGAATA AAGACGAACA GGCGAAGCCG
GAGACCGACG AGGCTCTGAC CATTGCGGCG ATCAAGGATG CGCTCGGCGA CAAGGTCTCC
GACGTGCGCG CCTCGCAGCG GCTGACCGCG AGCGCGTCCT GTCTGGTGGC CGGCGGGCTT
GGCCCCGACC GCGCGCTGGA GCGGATGCTG GCGCAGCAGA ATCGCGGCGC CGCCAGCAAG
CCGATCCTCG AGGTCAATCT GCGTCACCCG ATCGTCGCCG CGGTCGCCAA GGCCAACGCC
GCCGATGCGG CGGATCTGTC GCTGCTGTTG CTGGAGCAGG CGCAGATCCT CGACGGCGAA
TTGCCGGAAG ATCCGGCGGC GTTTTCCGCC AGGCTCAATC GGCTGGTGCT ACGCGCGCTG
TAG
 
Protein sequence
MTTTDTAPQS QPFQAEVAEL LNLMVHSVYS ETDIFLRELI SNASDALDKL RYESIAKPEL 
MADGGEPKIR ILPKKEPDTL SVIDNGLGMD RQELIDNLGT IAKSGTKSFL TKLTEAKDGA
GLIGQFGVGF YAAFMVADRI VVTSRRARSA EAWTWSSSGG AGFEIAPASE EDAARVTRGT
EIVLHLKKDA AKYLEPYEIE RVVGAYSDNI QFPIELVPEE GEPRQINSAS ALWQRSKSEL
TAEDYSQAYK QIAGAFDEPA MTLHYRAEGR YSYAVLLFAP STKPFDLFEP ARKGRVKLYV
RRVFITDEAD LLPSYLRFIR GVIDSEDLPL NLSREMLQNN PQLAQIRKAV TGKVIGELES
LGDKDPEAFG KIWDAFGLVI KEGIWEDYER RDKLLALSRF TTTKGENRTL KQYVEDLKEN
QTEIYYLVGD SIERLKSNPK LESAAARGIE VLLLTDPVDA FWTSAPLDFG GKPLKSLSQG
DVDFGQIPTT EENKDEQAKP ETDEALTIAA IKDALGDKVS DVRASQRLTA SASCLVAGGL
GPDRALERML AQQNRGAASK PILEVNLRHP IVAAVAKANA ADAADLSLLL LEQAQILDGE
LPEDPAAFSA RLNRLVLRAL