| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4916 |
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| Symbol | argD |
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| ID | 3973799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5486151 |
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| End bp | 5487368 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637928029 |
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| Product | acetylornithine transaminase protein |
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| Protein accession | YP_534757 |
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| Protein GI | 90426387 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
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| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0883749 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAGA GCGCTGCGAC CTCCCATCTT TTGCCGGTAT TTGCCAGGGC GGATCTCGCC
TTCGCGCGCG GTGAAGGGGT TTGGCTGATC TCGACCACCG GAGAGCGCTA TCTGGATTTC
ACCAGCGGCA TTGCGGTGAA TGCGCTCGGC CATTGCCATC CGCATCTGGT GGCGGCGCTG
CAGGAGCAGG CGACGCAGCT CTGGCACATG TCGAATTTGT TCAAGAGCCC GGACGGCGAG
CGCTTGGCGG CGCGGCTGTG CGAGCAGAGC TTCGCGGACT TGGTGTTCTT CGCCAATTCC
GGCGCCGAGG CGATGGAATG CGCGATCAAG ATCACCCGCA AGCACCACGC GGCCAAAGGT
CATCCCGAGC GTTACCGCAT CATCACTTTC GAAGGCGCGT TTCACGGCCG CACCCTGGCG
ACGCTGGCGG CGACCGGATC GGCGAAATAT CTCGACGGCT TCGGCCCGCC GATGGACGGC
TTCGACCAGG TGCCGCTCGG CGATATCGCG GCGGTGAAGG CCGCGATCGG TCCCGGCACC
GCCGGCATTC TGATCGAACC GTTGCAAGGC GAAGGCGGCG TGCGCTCGCC GCCGCCGGCA
TTCTTCCGGG CATTGCGCGA ATTATGCGAC GAGCGAGGCC TGCTGCTGAT TTTTGACGAA
GTGCAGACCG GCATGGGCCG CACCGGAATC TTGTTCGCGC ACCAGCGGTT CGGCGTGACG
CCGGACGTGA TGTCGCTGGC CAAGGCGCTG GGCGGCGGCT TTCCGATCGG CGCCTGCCTT
GCCACCGCGG ACGCCGCCGC CGGCATGACG CCCGGTTCGC ACGGCTCGAC CTTCGGCGGC
AATCCGCTGG CCGTCGCCGC CGGCAATGCG GTGCTCGACA TCATGCTGAA GCCCGGCTTC
TTCGAGCGGG TGCAGCAGAT CGCGCTATTG GCGCGGCAGA AGCTCGCCTC GGTGGTCGAT
CGCTATCCCG AGGTGCTGAG CGAAGTGCGC GGCGAAGGCC TGCTGATCGG GTTGAAGGCG
GTGGTGCCGT CGACCGATCT GGTGGCGGCG TTGCGCGAGC AGAAGCTGCT CACGGTTGGT
GCCGGCGACA ATGTGGTGCG GCTGTTGCCG CCGTTGATCG TCTCGGAGGC CGAAATCGAC
GACGCGGTGG AGCGGATCGA GCGCGCCTGC GTCGCGCTGT CGGCGGCGCC TGCGTTGCAG
CGGGAGGCCG GACGATGA
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| Protein sequence | MSKSAATSHL LPVFARADLA FARGEGVWLI STTGERYLDF TSGIAVNALG HCHPHLVAAL
QEQATQLWHM SNLFKSPDGE RLAARLCEQS FADLVFFANS GAEAMECAIK ITRKHHAAKG
HPERYRIITF EGAFHGRTLA TLAATGSAKY LDGFGPPMDG FDQVPLGDIA AVKAAIGPGT
AGILIEPLQG EGGVRSPPPA FFRALRELCD ERGLLLIFDE VQTGMGRTGI LFAHQRFGVT
PDVMSLAKAL GGGFPIGACL ATADAAAGMT PGSHGSTFGG NPLAVAAGNA VLDIMLKPGF
FERVQQIALL ARQKLASVVD RYPEVLSEVR GEGLLIGLKA VVPSTDLVAA LREQKLLTVG
AGDNVVRLLP PLIVSEAEID DAVERIERAC VALSAAPALQ REAGR
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