Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4883 |
Symbol | |
ID | 3973685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5450483 |
End bp | 5451376 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637927995 |
Product | ribonuclease BN |
Protein accession | YP_534724 |
Protein GI | 90426354 |
COG category | [S] Function unknown |
COG ID | [COG1295] Predicted membrane protein |
TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.178095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGCAAT TGCGCTACGC CTATCTGGTC GGGATCGACG CCTTCTACAC CTTCCTTGCC GATGACGGCT GGGCGATCGC CAGCCATATC GCGCTGTCCA GCCTGATGGC ACTGTTCCCG TTCCTGATCG TGTTGACCTC GCTGGCGGGT TTCTTCGGAT CGAAGGGACT GGCCGACCAG GCCGCGGAAC TGATGCTGCA GGTGTGGCCG ATCCAGGTCG CCGACGCGCT GTCCGGCGAA ATCCACGACG TGCTGACCAC GACGCGCGGC GACGCCCTGA CTATCGGCCT GTTGCTGGCG ATCTACTTCG CCTCCAACGG CATCGAGAGC CTGCGGGTGG CGCTGAACCG GGCCTATGCG GTGACCGAAA CGCGCAGTTG GTATTGGCTG CGATTGGAGT CGATCGGCTA CACGCTGGTC GCCGCCTTCA CCGCGCTGGC GATGGCGTTC CTGATCGTGC TCGGCCCGTT GCTGCTCGCG GCGGCGCGGC GCTACGTGCC GCTGGTGATC GAGGACAACG CCACGCTGCT CAACGTCACC CGCTACGGCA TCACCATCAC CGTGCTGATC ATCGCGCTGT TCCTGCTGCA CGCCTGGCTG CCGTGCGGGC GACGGACATT CTGGCAGATC CTGCCGGGGA TCATCTTCAC GATGGTCGCC TCGCTGCTCT CCGGGATCGG CTTCGGGATG TATCTGGCGC GCTTCGCCAG CAACTACGTG ACGATGTATG CGGGGCTCGC CTCGGTGATC ATCGCGCTGG TGTTCCTGTA TTTCATCGCC GCGATCTTCG TCTATGGCGG CGAACTAAAC GCCGCGATCA TCAAGTCGCG ACTGCCTCGC GGCGTGTCGC TTCAAGCAGC GCAGTCGCTA GCCCCCGAGG AGACACCGGT TTGA
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Protein sequence | MRQLRYAYLV GIDAFYTFLA DDGWAIASHI ALSSLMALFP FLIVLTSLAG FFGSKGLADQ AAELMLQVWP IQVADALSGE IHDVLTTTRG DALTIGLLLA IYFASNGIES LRVALNRAYA VTETRSWYWL RLESIGYTLV AAFTALAMAF LIVLGPLLLA AARRYVPLVI EDNATLLNVT RYGITITVLI IALFLLHAWL PCGRRTFWQI LPGIIFTMVA SLLSGIGFGM YLARFASNYV TMYAGLASVI IALVFLYFIA AIFVYGGELN AAIIKSRLPR GVSLQAAQSL APEETPV
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