| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4873 |
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| Symbol | |
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| ID | 3973675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 5442417 |
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| End bp | 5443682 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637927985 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_534714 |
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| Protein GI | 90426344 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCATT TCGACTATCG CAACGGCGTA CTGCACGCCG AGGCGGTGAA CCTGTCATCG
CTGGCGGATG CGGTCGGCAC GCCGTTCTAT TGTTACTCGA CCGCGACGCT GGAGCGGCAC
TACCGGGTGT TCAGCGAGGC CTTCGCGGGC GTCGACGCGC TGGTGTGCTA CGCGATGAAA
GCCAATTCCA ACCAGTCGGT GCTGCGCACG CTGGCCAAGC TCGGCGCCGG CGCCGACGTG
GTTTCCGGCG GCGAACTGCA GCGCGCGGTG GCCGCGGGCA TCCCGCCGCA AAAAATTCTG
TTCTCCGGCG TCGGCAAGAC CGCGACCGAG CTGCGCGCCG CGCTTGCGCA CGACATCCTG
TGCATCAACG TGGAGTCCGA GCCCGAGCTG GAATTGCTGT CGCGGATCGC CAGCGAGATG
GGCCGCACGG CGCGGATCTC GGTGCGGGTC AATCCCGACG TCGATTCGGG CAGTCACGCC
AAAATCTCCA CCGGCAAATC CGAGAACAAG TTCGGCATTC CGATCAGCCG CGCCCGCGAA
GTCTATGCTC GCGCCGCCAA GCTGCCGGGC CTCAAGGTCA CCGGCGTCGA CATGCATATC
GGCAGCCAGA TCACCGATCT GGCGCCGCTG GAAGTCGCGT TCCGGCTCTT GGCGGATTTC
GTCACCGTGC TGCGCGGCGA CGGCCACACG ATTTCGCACG TCGATTTCGG CGGCGGCCTC
GGCATTCCCT ATTTCGAGGA GCCAGGCGTG CCGCCGGAAC CGCAGGCCTA TGCCGCCATG
GTCAAGCGGG TGACGCACAA TCTCGGCTGC ACGCTGATGT TCGAGCCGGG CCGGCTGATC
GTCGGCAATG CCGGCATCCT GGTCGCCCGC GTCACCTACG TGAAGCGCGG CGACGCCAAG
AACTTCGTCA TCATCGATGC GGCGATGAAC GACCTGATCC GGCCGACGCT GTACGAGGCC
TATCACGACA TCCTGCCGGT GCAGCAGGCC GCGCCGGGAT CGCGCGACAT CGTCGCCGAC
GTGGTCGGCC CGGTGTGCGA GAGCGGCGAC TATCTGGCGC TGGATCGCAG CATGCCGGAG
CCTGCGCCCG GCGATCTCAT CGCGATCATG ACCGCCGGGG CCTATGGGGC GGTGCAGGCC
TGCACCTACA ACACCCGCGC GCTGGTGCCG GAGGTGCTGG TCAAGGGCGA CAACTACGCG
GTGGTGCGGC CGCGCGTCGA TGTCGAGCAA CTGATCGCGC TGGACCAGCC GGCGCCGTGG
CTGTGA
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| Protein sequence | MHHFDYRNGV LHAEAVNLSS LADAVGTPFY CYSTATLERH YRVFSEAFAG VDALVCYAMK
ANSNQSVLRT LAKLGAGADV VSGGELQRAV AAGIPPQKIL FSGVGKTATE LRAALAHDIL
CINVESEPEL ELLSRIASEM GRTARISVRV NPDVDSGSHA KISTGKSENK FGIPISRARE
VYARAAKLPG LKVTGVDMHI GSQITDLAPL EVAFRLLADF VTVLRGDGHT ISHVDFGGGL
GIPYFEEPGV PPEPQAYAAM VKRVTHNLGC TLMFEPGRLI VGNAGILVAR VTYVKRGDAK
NFVIIDAAMN DLIRPTLYEA YHDILPVQQA APGSRDIVAD VVGPVCESGD YLALDRSMPE
PAPGDLIAIM TAGAYGAVQA CTYNTRALVP EVLVKGDNYA VVRPRVDVEQ LIALDQPAPW
L
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