Gene RPC_4858 details

Gene Information

• Locus tag: RPC_4858
• Symbol: pyrE
• ID: 3973601
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris BisB18
• Kingdom: Bacteria
• Replicon accession: NC_007925
• Strand: +
• Start bp: 5422784
• End bp: 5423347
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637927970
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_534699
• Protein GI: 90426329
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.684444
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTCGAAAT CCGCCTCCCG CGCCCGCCTT GCCGACATCA TCCGCGCCCG CTCGTTCGGC 
CGCGGCGAAA TCACCTTGGC CTCCGGCCGC AAGAGCGACT TCTATTTCAA TCTGAAGCCG 
ACCATGCTCG ATCCGGAAGG CGCGGCATTG CTGGCGGAAC TGACCTTCGA GGCGCTGCGC 
GAGGACAATG TCGATTACAT CGGCGGGCTG GAGATGGGCG CGGTGCCGCT GGCCGGCGCG 
ATCGCGCAAT TGTCCTGGCT GAAGAACCAT CCGATCGCCG CGTTCTTCGT GCGCAAGAAG 
CCGAAGGAGC ACGGCGCCCG GCTCTCGGTC GAAGGGCTGT CGAAGACCGA GACGCTGCAG 
GGCAAGCGGG TGGTGATCGT CGAGGACGTC ACCACCACCG GCGGCTCGGC GATCAAGGCG 
GCCGAATCGG TGCGCGAGGC CGGCGGCGTG ATCGTGCTGG TGCTGACCAT GGTGGACCGC 
GAAGAAGGGG CCACCGAGGC GTTCGCCGCG GCCGGGCTGC CATTCCGCTC GCTCTACAAG 
GCCAGCGAGT TCCTCAAGAG CTGA 

 

Protein sequence

MSKSASRARL ADIIRARSFG RGEITLASGR KSDFYFNLKP TMLDPEGAAL LAELTFEALR 
EDNVDYIGGL EMGAVPLAGA IAQLSWLKNH PIAAFFVRKK PKEHGARLSV EGLSKTETLQ 
GKRVVIVEDV TTTGGSAIKA AESVREAGGV IVLVLTMVDR EEGATEAFAA AGLPFRSLYK 
ASEFLKS