| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4841 |
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| Symbol | |
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| ID | 3973545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 5402807 |
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| End bp | 5403979 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927953 |
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| Product | high-affinity nickel-transporter |
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| Protein accession | YP_534682 |
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| Protein GI | 90426312 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2215] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCT CCCGGATCGC CGCCGTCGCG CGGACCTTGC TGATCTGCGC CGCCGTGCTG
ACGCTGGCGC CGCTGCTCGA CGCCGCGCTG AGCCATGCGC TGGCGCAAAA TCCGTTCGGC
GGGCCGCGCC CGCCCGCAGC GCCGCAGGTC GGCGGCGTGG TCGGCTGGCT GTTGGAGCAG
CAGTCGCTGT TCTACCGCCA GATGTCGGCG ACGATCCGGG CGGCGAAATC CGACGGCAGC
GCGGTGTGGA CGCTGCTTTC GATCTCGTTC GCCTACGGCA TCTTCCATGC CGCCGGCCCC
GGCCACGGCA AGGCGGTGAT CTCGTCCTAT CTGGTCGCCA ACGAGGAGAC CGCGCGGCGC
GGCATCGTGC TGTCGTTCGT CTCGGCGCTG TTGCAGGCGC TGGTCGCGGT TCTGGTCGTC
GGGATCTGCG CCTGGCTGCT CAACGCCACC GCCAAGACGA TGTGCGGCGC CGAACGCGTG
ATCGAGATTG TGAGCTATGC GCTGATCGCG GCGTTCGGCG CGCGGCTGGT GTGGAGCAAG
GGCGGCGGCT TCTTTCGCGC GCTCTCGGCC GCGCGGCAGC GGCCGGCGGA CGCCTTCGCC
CTCGCCCCCG CCGCGGCGCA ACACCACGAT CATCACCAAC CTCACGCCGA GCCTCATGAC
GCAGCGCACC CGCACGCTCA TCAGGGGCAT CCCGAGGTTG CGCATTCGCA CGACCACGAC
CATCTCCCTC GCCATGACGA TCATCATCAC CACGACCATG GCGGCGCGGC CCACGTCCAT
GACGGGCACT GCGGCCACGC GCATGGTCCG GAACCGGCAG ACCTTGCCGG ACCCGGCGGC
TGGCGGCGCG GCTTCGGCGC GATTCTCGCG GTCGGGTTGC GGCCGTGTTC CGGCGCCATC
CTGGTGCTGG TGTTCGCACT TGCACAGGGC ATGTTCTGGG CCGGCGTCGC CGCTACCTTT
GCGATGGGCG TCGGCACCGC CATTACGGTT GCAACCATTG CCACCCTGGC GGTTTCAGCC
AAGGGGCTGG CGCGGCGGCT GGCGGCCGGC CGCGAAGCCG GCGGTGCATT GATCATGCGT
GGTGTAGAAT TCAGCGCAGC CGGACTGGTG CTGCTTTTCG GCCTCGGGCT GTTACTGGGC
TATATGGCCG CAGAGCGGGT GACCTGCCTA TGA
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| Protein sequence | MPRSRIAAVA RTLLICAAVL TLAPLLDAAL SHALAQNPFG GPRPPAAPQV GGVVGWLLEQ
QSLFYRQMSA TIRAAKSDGS AVWTLLSISF AYGIFHAAGP GHGKAVISSY LVANEETARR
GIVLSFVSAL LQALVAVLVV GICAWLLNAT AKTMCGAERV IEIVSYALIA AFGARLVWSK
GGGFFRALSA ARQRPADAFA LAPAAAQHHD HHQPHAEPHD AAHPHAHQGH PEVAHSHDHD
HLPRHDDHHH HDHGGAAHVH DGHCGHAHGP EPADLAGPGG WRRGFGAILA VGLRPCSGAI
LVLVFALAQG MFWAGVAATF AMGVGTAITV ATIATLAVSA KGLARRLAAG REAGGALIMR
GVEFSAAGLV LLFGLGLLLG YMAAERVTCL
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