Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4781 |
Symbol | |
ID | 3972984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | + |
Start bp | 5341163 |
End bp | 5342689 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637927893 |
Product | carboxylyase-like protein |
Protein accession | YP_534622 |
Protein GI | 90426252 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.588855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAACC GCGTTAAACC GCCCTTCCCG GACTTGCGCG CGTTCATGGC GTATCTTGAG TCCCGCGGTC AATTGGTCAG AATCCGCAGA CCGGTGTCTG TGGTGCACGA TCTCACCGAA ATCCACCGCC GTGTGTTGGC CGACAACGGC CCGGCGCTGT TGATCGAGAA CCCGATCAAG GCGGACGGCA CGCCGTCCGA AATGCCGATC CTGGTGAATC TGTTCGGCAC CGTGGAGCGG GTGGCCTGCG GGTTCGGCAT TACGCCGGAC AAATTGGGCG ACCTCGGCGA GACGCTGGCT GAAATGCGCG CGCCGGTGCC GCCGCAGAGC CTGTCCGACG CGCTCAGCAA ATTGCCGATG GCCCGCGCCG CCCTGGCGAT GCGGCCGAAG ACTGCGAAAT CCGCATCGGC GCAGAGCGTG GTGTGGAGCG GCGCCGACGT CGATCTCGGC CGCCTCCCGG TGCAGATCCC GTGGCCGAAC GAGCCCGCGC CCTTGATCAC CTGGGGGCTG GTGTTCACCA AACCGCCGGA GCACAGCGGC GGCGCCGACA ATGTCGGGGT CTATCGCATG CAGGTGCTCG GCCGCGACCG CCTGATCATG CGCTGGCTGG CGCATCGCGG CGGCGCCAAG CACCACCACC AGTGGCAGAA GCAGGGCCGC GACATGCCGG TGGCGATCGT GATCGGCGCC GATCCGGCGA TGATCCTCTC CGCCGTGCTG CCGCTGCCGG AAGATCTTTC CGAAATCAAA TTCTCCGGGC TGTTGCGCGG CGAGCGGCCG GTGCTGGTGC CTTGCGTCAG CGTGCCGCTG CAAGTGCCGG CGGACGCCGA GATCGTCATC GAGGGCATCG TCTCGGCCAC CGAGACCGCG CCGGAGGGGC CGTACGGCGA CCACACCGGC TATTACAATT CGGTCGAGCA GTTTCCGGTG CTGACCGTCA CCGCGATCAC CACGCGTAAA GATCCGATTT ATCTGTCGAC CTATACCGGG CGGCCGCCGG ACGAGCCGTC ACGGCTTGGC GAGGCGTTCA ACGACATCTT CCTGCCGGTG GCGAAGCGGC AGTTTCCCGA AATCGTCGAC CTCTGGCTGC CGCCGGAGGC CTGCTCGTAC CGGATCGCGG TGGCGTCGAT CAAGAAACGC TACCCCGGCC AGGCGCGTCG GCTGATGATG GGGCTGTGGT CGATGCTGCC GCAGTTCAGC TATACCAAAT TGCTGATCAT CGTCGACGAC GACATCGACG TGCGCGACTG GGCCGACGTG ATGTGGGCGG TCTCCACCCG CTGCGACACC TCGCGCGACA TGGTGTCGAT CTCCGACACC CCGATCGATT ATCTGGATTT CGCCTCGCCA AAGTCAGGCC TCGGCGGCAA ATTGGGCATC GACGCCACCA ACAAGATCGG CGCCGAGACG CAGCGCGAAT GGGGCGAGGT GCTGACCATG GATCCCGCCG TGTTGCAGCG GGTCGATGCG ATGTGGTCGT CGCTCGGGCT GGGACCGGCG CTGCCGCAAC GTAAGATGGT GCGATGA
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Protein sequence | MLNRVKPPFP DLRAFMAYLE SRGQLVRIRR PVSVVHDLTE IHRRVLADNG PALLIENPIK ADGTPSEMPI LVNLFGTVER VACGFGITPD KLGDLGETLA EMRAPVPPQS LSDALSKLPM ARAALAMRPK TAKSASAQSV VWSGADVDLG RLPVQIPWPN EPAPLITWGL VFTKPPEHSG GADNVGVYRM QVLGRDRLIM RWLAHRGGAK HHHQWQKQGR DMPVAIVIGA DPAMILSAVL PLPEDLSEIK FSGLLRGERP VLVPCVSVPL QVPADAEIVI EGIVSATETA PEGPYGDHTG YYNSVEQFPV LTVTAITTRK DPIYLSTYTG RPPDEPSRLG EAFNDIFLPV AKRQFPEIVD LWLPPEACSY RIAVASIKKR YPGQARRLMM GLWSMLPQFS YTKLLIIVDD DIDVRDWADV MWAVSTRCDT SRDMVSISDT PIDYLDFASP KSGLGGKLGI DATNKIGAET QREWGEVLTM DPAVLQRVDA MWSSLGLGPA LPQRKMVR
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