Gene RPC_4639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4639 
Symbol 
ID3972228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5186718 
End bp5187713 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content68% 
IMG OID637927751 
Productmolybdopterin dehydrogenase, FAD-binding 
Protein accessionYP_534480 
Protein GI90426110 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCCGT TCAGTTACAA CCGCGCGGCC AATGCCGGCG ACGCCGTTCG CCTTGGCGCT 
GGTCCTGGTG CGAAATATCT CGGCGGGGGG ACCAACCTGG TCGACCTGAT GCGCGAGACG
ATCGAGCGTC CGGTGGCGCT GGTCGATGTG ACGGCCCTGG ACGCTCGCAT CTTCGACACC
GACGATGGCG GCCTCTACAT CGGCGCGGCG GTCCGGAATT CGGCATTGGC GGCCGATCGG
CGGGTGCGCG CGAACTATCC GATGCTGACC CGCGCGATCC TCGCCGGTGC GAGCGCGCAG
ATCCGCAACA TGGCCACGGT CGGCGGCAAC CTGCTGCAGC GTACGCGCTG CACCTATTTC
TACGACGATG CCGGATCGGC GTGCAATAAG CGGTCGCCCG GTCAGGGTTG CGGCGCCCGC
GACGGATTCC ATCGCTATCA CGCGATCCTC GGTGCGTCGG AGCAGTGCAT CGCGACCCAT
CCATCGGATA TGGCGGTCGC GCTGGCCGCG CTCGACGCGG TGGTGCATTT GCAGGGCCGC
GGCGGAGCGC GATCGATCGC GCTGAGCGAT CTGCATCTGC TGCCGGGCGA GCGACCGGAC
ATCGAGACGG TGCTTGAGCC CGGCGAACTG ATCGCTGCGA TCGAATTGCC GCCGCTGCCG
CTGGCCCGCA ACTCGGCTTA TCGCAAGGTT CGCGATCGGG CGAGTTATGC GTTCGCGGTG
ATTTCCGTTG CCGCCGCGCT CGAGGTGAAG CACGGCCGTA TCACCGATGT CCGGCTCGCT
TTGGGCGGCG TCGCGCACAA GCCGTGGCGC GCCGCAAAGG CGGAAGCCGC GCTGATCGGC
CGGCCGCCGA GCGAGGTCAG CTTCCGTACC GCAGCCGATG CTGAACTTGC GGAAGCGGTT
CCGCTGCCGC TCAACGCCTT CAAGGTCGAA CTGGCCAAGC GCAGCATTGC CGCGGTGCTG
GCCGATCTCG CGCACGCCTC GGGAGCGCAG CCATGA
 
Protein sequence
MTPFSYNRAA NAGDAVRLGA GPGAKYLGGG TNLVDLMRET IERPVALVDV TALDARIFDT 
DDGGLYIGAA VRNSALAADR RVRANYPMLT RAILAGASAQ IRNMATVGGN LLQRTRCTYF
YDDAGSACNK RSPGQGCGAR DGFHRYHAIL GASEQCIATH PSDMAVALAA LDAVVHLQGR
GGARSIALSD LHLLPGERPD IETVLEPGEL IAAIELPPLP LARNSAYRKV RDRASYAFAV
ISVAAALEVK HGRITDVRLA LGGVAHKPWR AAKAEAALIG RPPSEVSFRT AADAELAEAV
PLPLNAFKVE LAKRSIAAVL ADLAHASGAQ P