Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RPC_4584 |
Symbol | |
ID | 3971883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris BisB18 |
Kingdom | Bacteria |
Replicon accession | NC_007925 |
Strand | - |
Start bp | 5117414 |
End bp | 5118376 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637927695 |
Product | malate dehydrogenase, NAD-dependent |
Protein accession | YP_534425 |
Protein GI | 90426055 |
COG category | [C] Energy production and conversion |
COG ID | [COG0039] Malate/lactate dehydrogenases |
TIGRFAM ID | [TIGR01763] malate dehydrogenase, NAD-dependent |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACGGA AGAAGATCGT CCTGGCCGGT GCCGGCCAAA TCGGCGGAAC GCTCGCCCAC CTGGCGATGC TGCACCGGCT CGGCGACGTC ACGCTGCTCG ACGTCAACGC CAATCCGCCG AAGGGCAAGG CGCTGGATCT GTCGCATGCC GCCGCGGTGG AGGGATGCGA CGCGGTGCTG ACCGGCACCG CCGATCAGGC CGATATCGCC GGCGCCGACG TCGTGATCGT CACCGCCGGC GTGCCGCGCC GGCCCGGCGT CGACCGCGAT GCGCTGCTGG CGATCAACCT GCCGGTGATG GAATCGATCG GCACCGCGAT CGGCCGCTAT TGTCCCGACG CGTTCGTGAT CTGCATCACC AACCCGCTGG ATGCGATGGT CTGGGCGCTG CGGCGGTTCT CCGGCCTGCC GCCCGCGCGC GTCGTCGGGA TGGGCGGCGT GCTCGACAGC GCGCGGCTGC GCAGCTTTCT GGCCGAAGCG CTCGGCGTCT CGGTGACCGA GGTGCAGGCG ATGACGCTCG GCGGCCACGG CGACGACATG GTGCCGCTGG TGCGCCAGGC CACCGTCGGC GGGGTGCCGT TGCCGGCGTT GGTGAAGATG GGCTGGATCA CCCAGCAAGC CATCGACGAC ATCGTGCAGC GGACCCGCAC CGGCGGCGCC GAGGTGGTCA ACCTGCTGTG GACCAGTTCG GCCTACTACG CGCCGGCGAG CGCCGCCATC GCCATGGCGA CGAGCTATCT CGGCGATCAG AAGCGGGTGT TCGCGGCCTC GGCGGCGCTG AGCGGCCAAT ACGGCGTCGA CGGTCTCCAT GTCGGCGTCC CGGTGATGAT CGGCGCCGGC GGCATCGAAA AAATCATCGA GCTGGAATTC GACGACGAGG AACAGCGTCA GTTCACGCGG TCGGTCGCCG CCGTCGCCGC CCTGGTCGAG GACTGCAAGC GGCTGCATCG CGGGCTGGCG TGA
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Protein sequence | MSRKKIVLAG AGQIGGTLAH LAMLHRLGDV TLLDVNANPP KGKALDLSHA AAVEGCDAVL TGTADQADIA GADVVIVTAG VPRRPGVDRD ALLAINLPVM ESIGTAIGRY CPDAFVICIT NPLDAMVWAL RRFSGLPPAR VVGMGGVLDS ARLRSFLAEA LGVSVTEVQA MTLGGHGDDM VPLVRQATVG GVPLPALVKM GWITQQAIDD IVQRTRTGGA EVVNLLWTSS AYYAPASAAI AMATSYLGDQ KRVFAASAAL SGQYGVDGLH VGVPVMIGAG GIEKIIELEF DDEEQRQFTR SVAAVAALVE DCKRLHRGLA
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