Gene RPC_4389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4389 
Symbol 
ID3970443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4895036 
End bp4895281 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content64% 
IMG OID637927498 
Producthypothetical protein 
Protein accessionYP_534231 
Protein GI90425861 
COG category[S] Function unknown 
COG ID[COG1598] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.400266 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0706735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACTCGG CTAAGCTGCG GGCGGGCTCA AGGAGCGGCG CTGATGCGCT ACGCCATCGT 
AATCGAACAG GCGGCAATTA TTCGGCCTAT GTGCCGGACC TGCCGGGCTG CGTCGCGACC
GGCGACAGCG TCGCGGCGGT CGAGACTGAA ATCCGCGCCG CCATTCGCTT TCACATCGAC
GGTTTTAAAG AGGACGGCCT GCCGGTACCC GCCGCCACCA GCATCGCGGC TTACGTCGAA
ACCTGA
 
Protein sequence
MHSAKLRAGS RSGADALRHR NRTGGNYSAY VPDLPGCVAT GDSVAAVETE IRAAIRFHID 
GFKEDGLPVP AATSIAAYVE T