| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4356 |
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| Symbol | |
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| ID | 3970833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4856491 |
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| End bp | 4857411 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927465 |
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| Product | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase |
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| Protein accession | YP_534198 |
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| Protein GI | 90425828 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1947] 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase |
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| TIGRFAM ID | [TIGR00154] 4-diphosphocytidyl-2C-methyl-D-erythritol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.915644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0109051 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGGG CGGCTGAGTT GAGCGACGTG ATGTCGGTGC AGGCGCTGCA CGATGAGGCG
CGTGCCAAGG TCAATCTGAC GCTGCGGGTG CTGGGCCGCC GCGTCGACGG CTATCACGAG
TTGGAAAGCG TGGTGGCGTT CGCCGACTGC GCCGACCGGC TGACGCTGCA AGCCGGATCC
GAACTCAGCC TCACCGCCAC CGGGCCGCGC GTCCAGGAAT GCGGCGACAA TGCCGACAAC
CTGGTGATCA AGGCGGCGCG GCTGCTCGGA GAACGCGTCG CCGATCTGCG CACGGGAAGC
TTCGCGCTCG ACAAGCAGCT GCCGATCGCC GCCGGCATCG GCGGCGGGTC GGCGGATGCC
GCGGCGGCGT TGCGGCTGTT GGCCCGCGCC AACGATCTGG CGCTGGACGA TCCCCGACTG
ATCGATGCCG CGCGAAAGAC CGGCGCCGAC GTGCCGGTGT GCCTAGCCTC AAAATCCTGC
ATCATGACCG GGATCGGCGA AACCCTGCTG CCGCTGGCGC TGCCGCGGCT GCCGGTGGTG
ATGGTCAATC CGCGCGTCGC GGTCGCCACC AAGGACGTGT TCGCGGCGCT CGGGCTGCGC
AGCGGTCAGT TGCGGGTCGG CGTCACCGAC GTCGTCACCG CGCCGAAATG GCCGGACCAG
GCCGCACCGC TCGATGCCTG GATCGCGGTG CTCGCCGCCG GCATCAACGA TCTCGAAGCG
CCGGCGAAGA AGCTGCAGCC GGTGATCGGC GAGGTTTTGA AGCTGCTCGG CAAGGCCCGG
GGCGCGCGGC TGGCGCGGAT GTCGGGGTCG GGTGCCACCT GTTTTGCGAT CTTTGCCGAC
GCCGCCGCAG CCGAGGCCGC GGCGCAAAGC GTCAGCGCAG CGCATCCCGA CTGGTGGGTG
CACGCCGGGA CGCTGGGCTG A
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| Protein sequence | MARAAELSDV MSVQALHDEA RAKVNLTLRV LGRRVDGYHE LESVVAFADC ADRLTLQAGS
ELSLTATGPR VQECGDNADN LVIKAARLLG ERVADLRTGS FALDKQLPIA AGIGGGSADA
AAALRLLARA NDLALDDPRL IDAARKTGAD VPVCLASKSC IMTGIGETLL PLALPRLPVV
MVNPRVAVAT KDVFAALGLR SGQLRVGVTD VVTAPKWPDQ AAPLDAWIAV LAAGINDLEA
PAKKLQPVIG EVLKLLGKAR GARLARMSGS GATCFAIFAD AAAAEAAAQS VSAAHPDWWV
HAGTLG
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