| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4343 |
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| Symbol | |
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| ID | 3971223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4842308 |
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| End bp | 4845283 |
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| Gene Length | 2976 bp |
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| Protein Length | 991 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927452 |
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| Product | pyruvate phosphate dikinase |
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| Protein accession | YP_534185 |
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| Protein GI | 90425815 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0574] Phosphoenolpyruvate synthase/pyruvate phosphate dikinase |
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| TIGRFAM ID | [TIGR01828] pyruvate, phosphate dikinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.19603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGTATG GCGCCACCCT TTCCCATTAT TGCGGACTGT TGAGCGCCAT GGCTAAAGCA
GCTTCCAAGA CCAAAAAAGT CGCCGCGAAA TCAAAATCTT CCGTCACCGC CCGGGCCAAG
GCCGCGGTGC GCAAGACGGT GGCGAAAAGT CCGCCGAAAG CCGCCGTGAA GGCGGTGGCG
AAGCCTGCCA AGAAGGTCGT CGCCAAGCCG ATGAAAGCGC CGGCCAAGGC AGCCGTGAAA
GCGCCGGTGA AGGCAGCGTC GAAAGCGCCG GCGAAAAAGC CGGCGGCCGA TGCCTTCGCC
AACAAGTGGG TGTTCAGCTT CGGCGACGGC AAGGCCGAAG GCAACGCCAG CCTGCGCAAC
CTGCTGGGCG GCAAGGGCGC CAACCTCGCC GAGATGGCAA ATCTCGGTCT GCCGGTGCCT
CCCGGCTTCA CCATTCCGAC CACGGTCTGC AGCTATTTCT ACGCCCACGA CAAATCCTAC
CCGAAGGAGC TCGCGAGCCT GGTCGACAAG GCGCTCGCCA CCGTCGGCAA GATCACCGGC
AAGGGGTTCG GCGACGCCAA GAACCCGCTG TTGGTCTCGG TGCGCTCCGG CGGCCGCGCC
TCGATGCCCG GCATGATGGA CACCGTGCTC AATCTCGGGC TCAACGACGT CACCGTGGAA
GCGCTCGCCG CATTGTCGGG CGATCGCCGC TTCGCCTATG ACAGCTATCG CCGCTTCATC
ACCATGTATT CCGACGTGGT GCTCGGCTTC GACCACCATC ATTTCGAAGA AATCCTCGAC
ACCTACAAGG ACGGCAAGGG CTACACCCTC GATACCGACC TCGACGGCGA CGATTGGATC
GACCTGGTCG GCCAGTACAA GGAAGCGGTC GCCCGCGTGA CCGGCAGCGA TTTCCCGCAG
GACCCGCACG CGCAATTGTG GGGCGCGATC GGCGCGGTGT TCTCCTCCTG GATGAACGCC
CGCGCGGTGA CCTACCGCAA GCTGCACGAC ATTCCGGAAT CCTGGGGCAC CGCGGTCAAC
GTCCAGGCGA TGGTGTTCGG CAATATGGGC GAGACCTCGG CGACCGGCGT GGCGTTCACC
CGCAACCCGT CGACCGGCGA GAGCAGCCTG TATGGCGAAT TCCTGATCAA CGCCCAAGGC
GAAGACGTGG TGGCGGGGAT TCGCACCCCG CAAGACATCA CCGAATATGC GCGAAAAGCG
TCGGGCTCCG ACAAGCCGTC GATGGAAGTC GCGATGCCGG ACGCGTTCAA CGAACTGACC
CGGATCTATA CCCTGCTCGA GAAGCACTAT CGCGACATGC AGGACATGGA GTTCACCGTC
GAGCAGGGCA AGCTGTGGAT GCTGCAGACC CGCGGCGGCA AGCGCACCGC CAAGGCCGCG
CTGCGGATCG CGGTCGAACT CGCCAGCGAG GGCGTGATCA ACCAGAAGGA AGCGGTGTCG
CGGATCGATC CCGCCTCGCT CGACCAGTTG CTACACCCGA CCATCGATCC GAACGCCAAG
CGCGACGTGA TCGCCACCGG CCTGCCTGCC TCGCCGGGCG CGGCTTCCGG CGAGATCGTG
TTCTCCTCGG ACGAGGCCGC CAAGCTGCAG GCCGACGGCC GCAAAGTGAT CCTGGTCCGC
ATCGAGACCA GCCCCGAGGA CATCCACGGC ATGCACGCCG CGGAAGGCAT CCTCACCACC
CGCGGCGGCA TGACCTCGCA CGCCGCCGTG GTGGCGCGCG GCATGGGCAA GCCCTGCGTG
TCCGGCTGCG GCGCGATCCG GGTCGATTAC GGCCGCGGCA CCATGAGCAT CGGCACCCGC
ACCTTCAAGA CCGGCGACAT CATCACCATC GACGGCGCGG TCGGCCAGGT GCTGGCCGGG
CGGATGCCGA TGATCGAGCC GGAACTGTCC GGCGAGTTCA ACACGCTGAT GGGCTGGGCC
GATCAGGTGC GCAAGCTCGG GGTTCGGGTC AACGCCGACA CCCCGGTCGA CGCCCGCACC
GCGATCAAGT TCGGCGCCGA AGGCATCGGG CTGTGCCGCA CCGAGCATAT GTTCTTCGAG
GAGACCCGGA TCCGCACCGT GCGGGAGATG ATCCTGTCGG AAGACGAACA GTCGCGTCGT
CAGGCATTGG CGAAATTGCT GCCGATGCAG CGCGCGGATT TCGTCGAACT GTTCGAGATC
ATGAAGGGCA TGCCGGTGAC GGTGCGGCTG CTCGATCCGC CGCTGCACGA GTTCCTGCCG
CACAGCCAGG CCGAGATCGA GGAAGTCGCG CGTGCGATGA ACACCGATCC ACGTAGGCTC
GCCGATCGCG CCCGCGAATT GGCCGAGTTC AACCCGATGC TCGGCTTCCG CGGCTGCCGT
CTGGCGATCG CCTATCCGGA AATCGCCGAG ATGCAGGCCC GCGCCATCTT CGAGGCCGCG
GTCGAGGCGC AGAAGCGCAC CGGCGTCGCG GTCGGGCTCG AAGTGATGGT GCCGTTGATC
GCCACCAAGA TGGAGTTCGA TCTGGTCAAG GCGCGGATCG ACGCCACCGC GCATTCGGTG
TTCCGCGAAA CCGGCGGCAA GATCGATTAC GCGGTCGGCA CCATGATCGA ACTGCCGCGC
GCCTGTCTGA AGGCCGGGCA GATCGCCGAG ACCGCCGAAT TCTTCTCGTT CGGCACCAAC
GACCTGACCC AGACCACCTT CGGCATCAGC CGCGACGACG CCGCGAGCTT CCTCGGCACC
TACATCGCCC GCGGCATCCT GGAGATCGAC CCGTTCGTCA GCATCGATCG CGTCGGCGTC
GGCGAGTTGG TCAAGATCGG TGTCGAGCGC GGCCGCAAGA CCCGCCCCGA CCTCAAGGTC
GGGATCTGCG GTGAACACGG CGGCGATCCG GCGTCGGTGG CGTTCTGCCA CGAGATCGGC
CTCAACTACG TGTCGTGCTC ACCCTACCGC GTGCCGATCG CGCGGCTCGC CGCCGCGCAA
GCCGCGCTCG GCAAGGAAGT CGCAAGCCAG GCCTGA
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| Protein sequence | MVYGATLSHY CGLLSAMAKA ASKTKKVAAK SKSSVTARAK AAVRKTVAKS PPKAAVKAVA
KPAKKVVAKP MKAPAKAAVK APVKAASKAP AKKPAADAFA NKWVFSFGDG KAEGNASLRN
LLGGKGANLA EMANLGLPVP PGFTIPTTVC SYFYAHDKSY PKELASLVDK ALATVGKITG
KGFGDAKNPL LVSVRSGGRA SMPGMMDTVL NLGLNDVTVE ALAALSGDRR FAYDSYRRFI
TMYSDVVLGF DHHHFEEILD TYKDGKGYTL DTDLDGDDWI DLVGQYKEAV ARVTGSDFPQ
DPHAQLWGAI GAVFSSWMNA RAVTYRKLHD IPESWGTAVN VQAMVFGNMG ETSATGVAFT
RNPSTGESSL YGEFLINAQG EDVVAGIRTP QDITEYARKA SGSDKPSMEV AMPDAFNELT
RIYTLLEKHY RDMQDMEFTV EQGKLWMLQT RGGKRTAKAA LRIAVELASE GVINQKEAVS
RIDPASLDQL LHPTIDPNAK RDVIATGLPA SPGAASGEIV FSSDEAAKLQ ADGRKVILVR
IETSPEDIHG MHAAEGILTT RGGMTSHAAV VARGMGKPCV SGCGAIRVDY GRGTMSIGTR
TFKTGDIITI DGAVGQVLAG RMPMIEPELS GEFNTLMGWA DQVRKLGVRV NADTPVDART
AIKFGAEGIG LCRTEHMFFE ETRIRTVREM ILSEDEQSRR QALAKLLPMQ RADFVELFEI
MKGMPVTVRL LDPPLHEFLP HSQAEIEEVA RAMNTDPRRL ADRARELAEF NPMLGFRGCR
LAIAYPEIAE MQARAIFEAA VEAQKRTGVA VGLEVMVPLI ATKMEFDLVK ARIDATAHSV
FRETGGKIDY AVGTMIELPR ACLKAGQIAE TAEFFSFGTN DLTQTTFGIS RDDAASFLGT
YIARGILEID PFVSIDRVGV GELVKIGVER GRKTRPDLKV GICGEHGGDP ASVAFCHEIG
LNYVSCSPYR VPIARLAAAQ AALGKEVASQ A
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