Gene RPC_4328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4328 
Symbol 
ID3971516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4826156 
End bp4826533 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content67% 
IMG OID637927437 
Producthypothetical protein 
Protein accessionYP_534170 
Protein GI90425800 
COG category[S] Function unknown 
COG ID[COG5451] Predicted secreted protein 
TIGRFAM ID[TIGR02301] conserved hypothetical protein TIGR02301 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.363199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAGCC GATTTATCGC CATCCTGATC GTCGTCGCGA CCTGCGGCCT CGCCCCAGTC 
CGGGCGCAGG ACGCCGCGGC GCCGTTCGAC GGCGACCTGC AGCGACTGGC GGAAATTCTC
GGCGCGTTGC ATTACCTGCG CGGGATCTGC GGCGCCAACG AGGGCACCAA ATGGCGCAAC
GAGATGCAGG CGCTGGTCGA CGCCGAAACC CCCTCCGGCG AGCGTCGCAC CAGGATGATC
GCCGGCTTCA ACCGCGGCTA TAACGGCTTC CAGCAGACCT ATCGGACCTG CACCCCGGCG
GCCGACATCG CGATCCGCCG CTATCTCGAA GAAGGCTCGC GGATCTCGCG GGATCTGACG
GCGCGCTACG CGAATTAG
 
Protein sequence
MLSRFIAILI VVATCGLAPV RAQDAAAPFD GDLQRLAEIL GALHYLRGIC GANEGTKWRN 
EMQALVDAET PSGERRTRMI AGFNRGYNGF QQTYRTCTPA ADIAIRRYLE EGSRISRDLT
ARYAN