| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4287 |
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| Symbol | |
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| ID | 3971567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4785340 |
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| End bp | 4786233 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637927395 |
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| Product | 3-beta hydroxysteroid dehydrogenase/isomerase |
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| Protein accession | YP_534129 |
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| Protein GI | 90425759 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.018546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGGTA GGAGACGTCT GATTGTTACC GGAAGCAGTG GGCGCATTGG TCGGACCATC
GCAGCCGCGG CGGCCAAGTC CTATGCGGTC ACAGGTGTCG ATATCGTTCC GTCCGAGACC
ACGGACATTG TTGCGGATGT TACCGACTAC GAGAAACTTG TGAGGGCGTT TGACGGGGCC
TCTGCACTGA TCCACAGTGC CGGGCTGCAT GCACCTCATG TAGGCCTGTT CTCCGAACAC
GAATTTCGCA GGGTGAATGT AACGGGCACC GCGACGATCA TTAGGGCGGC GCTTACGACG
GGCGTTCGCC ATATGATCTT CACGAGTACA ACTGCGGTTT TCGGCGTGAG GCAGGACGTC
GTCGGCGATG CCGAATGGAT CGACGACATG TCACAGCCAC ATCCGCGAAC GATCTATCAC
CATACGAAAC TGGAGGCCGA AGCGCATCTT GCCGCCGTGG CAGGCCCTCA GTTGAAGGTC
ACGGTGTTGC GTCTAGGGCG TTGTTTTCCT GAGGCGGTGA ACCTGATGGC GCTCTATCGT
CTCTACCGCG GGATCGATGA GCGCGACGCG GCTGTTGCCC ATCTGCGAGC GCTCGATGCG
GATGGGCCAC ATCTCGCCAC GCACATCGTT TCCGGTACGA CGCCGTTCTT GCGTGAGGAT
CGGGAACTAT TGGGGGTTGA CGCCCCGACA GCGATCAGGC TGCGGTGTCC GGCTCTTGCT
CAAGAATTTT CGACACACGG TTGGGCATTT CCTCAAGCGA TTGATCGAGT CTACGACAAC
GCCGGTGCCT GTGCCGCGTT GAATTGGCAT CCCCAATTCG GCTTCGAGCA CGTCCTAGCG
GCATTCCATA GCGGTTGCCA AAGCGTTTTG CCTCCGATAT CGGTTCCGCA GTAA
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| Protein sequence | MRGRRRLIVT GSSGRIGRTI AAAAAKSYAV TGVDIVPSET TDIVADVTDY EKLVRAFDGA
SALIHSAGLH APHVGLFSEH EFRRVNVTGT ATIIRAALTT GVRHMIFTST TAVFGVRQDV
VGDAEWIDDM SQPHPRTIYH HTKLEAEAHL AAVAGPQLKV TVLRLGRCFP EAVNLMALYR
LYRGIDERDA AVAHLRALDA DGPHLATHIV SGTTPFLRED RELLGVDAPT AIRLRCPALA
QEFSTHGWAF PQAIDRVYDN AGACAALNWH PQFGFEHVLA AFHSGCQSVL PPISVPQ
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