| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4269 |
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| Symbol | |
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| ID | 3971692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4753852 |
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| End bp | 4754562 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637927373 |
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| Product | Hly-III related proteins |
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| Protein accession | YP_534112 |
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| Protein GI | 90425742 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.673544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.633803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATCT TCCAATTGAA GCAAATCGCG TCGTATTCCC GCCCCGCCGC GAACTCCGGC
CACGCCGCTG GCGCGGTGGG CTGGCATTAC GACCGCGCCG AGCTGATCGC CGACGGCGTC
GTCCATGTTC TGGGCGTCGC GCTGGGCGTG ATCGCGGTGA CGGTGATGAT CGTGTTGGCC
GCGGTGTTTT CCTCGCCTTC CGACATCCTG CTGGTGCTGG TTTATGCCGG CGGCTTGCTG
GCGATGCTGG GGTTTTCCGC GGCCTACAAT CTGTGGCCGG TGTCGCGGCG CAAATGGATG
CTGCGGCGGT TCGACCATTC GGCGATCTAC ATCCTGATCG CCGCGACCTA CACGCCGTTG
CTGGCGCAGA TCAAGGACCA GGTGTTCGCC GCGGCGCTGC TCGGCGGGGT CTGGGGCGTC
GCGATTATCG GTATCCTTCT CAAGCTGTTC GTGCCGGGCC GGTTCGACAA AGTGTCGATC
GGGCTGTATC TGGCGATGGG CTGGAGCGGG CTGATCGCCT ACGAATCGGT GGCGGCCGCG
GTGCCGCATC TGGCGCTGTG GTTCATCGCC ATCGGCGGCG TGCTGTACAC GCTGGGCGTG
GTGTTTCATG CCTGGCGGGC ACTCCGGTTC CAGAATGCGA TCTGGCACTC CTTCGTGCTG
CTCGGCGCCG CTTGCCACTA CACCGCGGTG CTCGACACCG TGCTTGCGTA A
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| Protein sequence | MPIFQLKQIA SYSRPAANSG HAAGAVGWHY DRAELIADGV VHVLGVALGV IAVTVMIVLA
AVFSSPSDIL LVLVYAGGLL AMLGFSAAYN LWPVSRRKWM LRRFDHSAIY ILIAATYTPL
LAQIKDQVFA AALLGGVWGV AIIGILLKLF VPGRFDKVSI GLYLAMGWSG LIAYESVAAA
VPHLALWFIA IGGVLYTLGV VFHAWRALRF QNAIWHSFVL LGAACHYTAV LDTVLA
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