| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4193 |
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| Symbol | |
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| ID | 3972550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 4658260 |
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| End bp | 4659012 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637927295 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_534036 |
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| Protein GI | 90425666 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGGAC GGGTTCTAAT CACGGGCGCC GGGCGCGGTA TAGGGCTCTC GATCGCGCGC
GTGCTGGCGC GGGACGGCTT TTCGTTGGCG CTGGTGACCA AGAGCGAGTC GTCAGCCACA
AGGCTTCGAG CCGAGCGATT TGTGGTCGAC GCCGATGCCA TCGTTGTTGC TTTCGATCTT
GCCGATGATG CAGCTTTGGC GGATTTCGTC ACGAAATGGC GAGAGCCGTT GTGGGGAATT
GTCCACAATG CCGGGATTTG CGCGACGGCG ACGCTTGCGG ACTGCGAGCA TGATCCCTGG
CGTGAAGTGC TGGCCGTAAA CCTCGAAGCG CCTTATCGAC TGATGCGCGG CTTGCTACCA
AGTCTCGCCC GCCCGGGCCG GATCGTCACT ATCGGCTCAC AGCTATCGGT CGAAGGACGT
GCGGGCTACG GTGCGTACTG CGCCTCAAAA TTTGGCCTTA TCGGTCTCAC CAAGTGCTGG
GCGAAGGAAC TCGGCCGCGA AGGCGTCACG GTCAACGCGG TGTGTCCCGG CTGGGTCGAC
ACCGAAATGA CCGGCAATGA CGTCGCTCGC ATCGCCGCGG AGATGGGGCG CGACGCCGCC
TCGTTCAAGG CCGAAATCGC TGATCCGCTG GAGTTGAAGA GGTTCAACAC CCCTGAAGAA
GTCGCCGAAC TGGTCGCGTT TCTGATGTCG GACAAGTCGT CCGGCATCAC TGGTCGTGCC
TGGCTGATGC AGACGATCTG GAACCAACAG TAA
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| Protein sequence | MTGRVLITGA GRGIGLSIAR VLARDGFSLA LVTKSESSAT RLRAERFVVD ADAIVVAFDL
ADDAALADFV TKWREPLWGI VHNAGICATA TLADCEHDPW REVLAVNLEA PYRLMRGLLP
SLARPGRIVT IGSQLSVEGR AGYGAYCASK FGLIGLTKCW AKELGREGVT VNAVCPGWVD
TEMTGNDVAR IAAEMGRDAA SFKAEIADPL ELKRFNTPEE VAELVAFLMS DKSSGITGRA
WLMQTIWNQQ
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