Gene RPC_4185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4185 
Symbol 
ID3972542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4650642 
End bp4651619 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content61% 
IMG OID637927287 
Producthypothetical protein 
Protein accessionYP_534028 
Protein GI90425658 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCTAC TGTTGACAAC CTATCATCAA GCTTTTCTGG CGCCGGGCGG GGGAGAGACC 
GAATTTTTGT CGCTGGCGGA ATACATGAGC GAAAACGGCG TGCGCGCCGA TTTCTACGGC
CCCACCTCGC GTCCGCTGCG CTATTACGAT GCCGTGGTGC ATTTCTCTGC GGTCGGCGGT
GGCGAGGGAT TGCTGAGAAA TATTCGGGAT TCCGGAAAGC CCATCATCCT TCTGCCGAAT
TATAACTTCT TCAGCCCGGC GCCCGAGTCG CTGGCTGTGG TGCAAGAGCA CTTTGATCTC
GCCGACCTGA TCGTACTGAG AACCTTCGTC GAAGCCGAGC TTTGCAAAGC CACCTTCAAG
GTCGACGAAG CCAAGCTGGT CGTGGTTCAG CCGGGCATCA ATCCGTCGTT CGCCAAACCG
GTCGCGGACG ATCTGTTCCG ATCCGCCTAT GGCGTCGATC GATTTGTGCT GTGGGTGGGG
GCGCTGGACG AAGCCAAGCA GCAGTTGCAG GCGATCGAAG CGCTGAACGA ATTCGCCGTG
CCGTTGATCT TCATCGGCGG CTATCGCGAT CGCGGCTACT TCGAGAAATG CAAGGCCGCG
GCATCCGAGA ACATTCGATT TTTGCCGTAT CTGCAGCCCG GCTCCGAGAT CATTCGCTCG
GCCATGCAGA GTTGCAACGT GTTCCTGGAA CTGGGGGTCG ATTTTCCGGG CCATTCCGCC
ATCGAGGCCG GGCTCGCCGG CGCGCCCTTG GTGCTGCGCG AGCATCCGTG GTCGCGGGAA
CTGCTCGGCG ATGACGTCAG ATATATTTCG GATGACGCGC CGGCGGCGAT CCGGGAGGCG
GTGAGCGAGG TTTTGGCTCA TGGCAAGCGC GGTCTCTTGG TCGATCGCAT CAAGCGCGGT
CTGGTTCAGC CCGACAGCAC CGCGCGTTTG ATCGCGGAAA TCGAGGCCTA TGTCGAGCGG
CGAAAGGCCC GGGGCTGA
 
Protein sequence
MRLLLTTYHQ AFLAPGGGET EFLSLAEYMS ENGVRADFYG PTSRPLRYYD AVVHFSAVGG 
GEGLLRNIRD SGKPIILLPN YNFFSPAPES LAVVQEHFDL ADLIVLRTFV EAELCKATFK
VDEAKLVVVQ PGINPSFAKP VADDLFRSAY GVDRFVLWVG ALDEAKQQLQ AIEALNEFAV
PLIFIGGYRD RGYFEKCKAA ASENIRFLPY LQPGSEIIRS AMQSCNVFLE LGVDFPGHSA
IEAGLAGAPL VLREHPWSRE LLGDDVRYIS DDAPAAIREA VSEVLAHGKR GLLVDRIKRG
LVQPDSTARL IAEIEAYVER RKARG