| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4152 |
|---|
| Symbol | |
|---|
| ID | 3973987 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris BisB18 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007925 |
|---|
| Strand | - |
|---|
| Start bp | 4611691 |
|---|
| End bp | 4613325 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637927255 |
|---|
| Product | DNA methylase N-4/N-6 |
|---|
| Protein accession | YP_533996 |
|---|
| Protein GI | 90425626 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2189] Adenine specific DNA methylase Mod |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCG CCAAGTCCAC GCCTAAGCAA CTCGCGCCGA ACCATCTGTA TTACGGCGAC
AATCTCGACA TCCTGGGTGG TTCGATCGCC AGCGAGTCGG TCGATCTGGT CTATCTCGAC
CCGCCGTTCA ATTCCAACGC CAGCTACAAC GTGCTGTTTC ACGCGCCGGG AGGCGAAAGC
AGCCCAGCGC AGATCGAGGC TTTTGATGAC ACTTGGCACT GGAGCCCAAC AGCTGAGCGC
GCCTTTGACG AGGTGATCCA ATCGGGCAAT TCCGATGTCA GCGAAATGCT GCGGGCAATG
CGCTCCTTCC TCAAAGACAA CGACATGATG GCGTACCTTG CCATGATGGC GGTTCGTCTC
CTGGAACTGC ATCGGGTGCT TAAGCCGACC GGATCGCTAT ATCTTCACTG TGACCCGACA
GCGAGCCACT ACTTAAAGAT CTTACTAGAT GCGGTGTTTG GTAAGCGGCA GTTCAAAACA
GAAATTAGTT GGCGTAGACA ATCTGCTCAC AACGATGCAA AGCAGGGCCG GACGCAGTAC
GGAAATGTTC GGGATATCAT TTTCTTTTAC ACGAAGTCTG ACAAGTGGAA TTGGAACCAG
CAATACACGC CTTACTCTGA GGAGTATGTT AGAGATTTTT ATAAGTTTTC AGATCCAGAT
GGTCGTCGGT ACCGCTTGAG CGACATCACC GGGCCAGGAG GAGCAGCCAA AGGAAATCCT
AGCTACGAAA TATTTGGTGT CACCCGCTAC TGGCGCTACT CCAAACTGCG AATGCAACAA
CTTATAAATG AAGGGAAGGT AATTCAAACG CGTCCCGGAA CCGTGCCTGC TGAAAAGAGG
TATCTCGACG AGATGCCCGG CGTAGCGCTT CAGAATGATT GGAGTGACAT TGGCCTTCCG
TCGCGAAAAG AAAACCTGGG TTACGGTACT CAAAAGCCCG TTGCTTTGCT TGAACGCATC
ATCTCCGCTT CGTCTAACGA AGGCGACGTG GTGCTCGATC CGTTCTGCGG CTGCGGCACC
ACCGTGCATG CGGCGCAGAA GCTGAACCGC AACTGGATCG GTATCGATGT CACCCATCTG
GCGATCAATC TTATCAAGCG GCGGCTGATC GATGCCTTTC CGCATGCTCA GTTCGAAATT
CACGGTGTGC CGAAGGACAT CGGCGCGGCG CAGGCGCTGG CCACGCAGGA TAAGCATCAG
TTTCAGCTCT GGGCGCTGTC GATGGTCGAG GCGCAGCCCT ACAAGGGCGG CCAGAAGGGT
GCCGATGGCG GTGTCGACGG CTATCTGTAC TTCAAGCCCG ACGGCAAGAT CACCGAGAAG
GCGATTGTCT CGGTCAAGGG CGGCGGCAAT GTCGGCGTCG GCATGATTCG CGACCTGATC
GCGACGGTTG ATCGCGAGAA GGCCAAGATC GGCATCTTCC TGACCCTGGA AGACCCGACC
ACCAGGATGC GCACCGAAGC CACCGCCGCC GGCTTCTACG AGAGCCCGCT GCACGGCAAA
TTCGAGAAGA TTCAGATCCT CACCATCGAG GATTTGTTCG ACGGTAAGCG CCCTCATATC
CCCTGGGTCG ATCCCTCAGT CTTCAGGAAA GCCAAACGCG AGAATCTAGA AAAGCAGAGC
ACGCTGGATT TGTAA
|
|---|
| Protein sequence | MSSAKSTPKQ LAPNHLYYGD NLDILGGSIA SESVDLVYLD PPFNSNASYN VLFHAPGGES
SPAQIEAFDD TWHWSPTAER AFDEVIQSGN SDVSEMLRAM RSFLKDNDMM AYLAMMAVRL
LELHRVLKPT GSLYLHCDPT ASHYLKILLD AVFGKRQFKT EISWRRQSAH NDAKQGRTQY
GNVRDIIFFY TKSDKWNWNQ QYTPYSEEYV RDFYKFSDPD GRRYRLSDIT GPGGAAKGNP
SYEIFGVTRY WRYSKLRMQQ LINEGKVIQT RPGTVPAEKR YLDEMPGVAL QNDWSDIGLP
SRKENLGYGT QKPVALLERI ISASSNEGDV VLDPFCGCGT TVHAAQKLNR NWIGIDVTHL
AINLIKRRLI DAFPHAQFEI HGVPKDIGAA QALATQDKHQ FQLWALSMVE AQPYKGGQKG
ADGGVDGYLY FKPDGKITEK AIVSVKGGGN VGVGMIRDLI ATVDREKAKI GIFLTLEDPT
TRMRTEATAA GFYESPLHGK FEKIQILTIE DLFDGKRPHI PWVDPSVFRK AKRENLEKQS
TLDL
|
|---|
| |