| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_4133 |
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| Symbol | |
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| ID | 3970326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4593236 |
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| End bp | 4593907 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637927237 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_533978 |
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| Protein GI | 90425608 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAGCTG ACTGGCAAGT CGACGCGGTG CTGCTCGACA TGGACGGCAC CCTGGTCGAC
ACCGAGCGGG TCTACATCAC GAGCTTGACC GAAGTGCTCG ACGGCTTCGG CTATCCCGAC
GCCGCCGCGG TCTGCGCCGC CATGGTCGGG CTGCCGGGTC CGGAATGCCA GCAATTGCTG
GTCGAGCGTT ACGGCGCCGA CTTTCCGTTG CCCAAGATCA ACCGCGCTTT CGCCGAGAGG
CGTGACGCCA TGCTGGCGGA TGGCCTGCCG CTGAAGCGAG GTGCGGTCGA ATTGCTGGAC
GCGCTGCGCG CGGCGGATTG GCCGATGGCG GTGGTCACTT CGGCATCGCA GGGCACCGCC
GAGGCGCATC TGACGCTGGG CGGCATCCGC GCGCGGTTCG AACTGATCGT CACCCGCGAC
GACGTCGCGC ACGGCAAGCC CAATCCGGAT CTCTATCTGC TGGCGGCAAA GCGGCTCGGC
GTGACGCCGC GGGCCTGCGT CGCGGTGGAG GATTCCAGCG TCGGCATCGC CGCGGCATTC
GCCGCCGGTG CCATCGCGCT GATGGTGCCG GACCTGCAGC AGCCGAACGC CGCCACCCGC
GGCCAATGCG CCGCGGTGCT GCCCGATCTC AACGCCGTGC TGGCGCTGCT GCGCACGCGG
GCGGGGCTTT GA
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| Protein sequence | MTADWQVDAV LLDMDGTLVD TERVYITSLT EVLDGFGYPD AAAVCAAMVG LPGPECQQLL
VERYGADFPL PKINRAFAER RDAMLADGLP LKRGAVELLD ALRAADWPMA VVTSASQGTA
EAHLTLGGIR ARFELIVTRD DVAHGKPNPD LYLLAAKRLG VTPRACVAVE DSSVGIAAAF
AAGAIALMVP DLQQPNAATR GQCAAVLPDL NAVLALLRTR AGL
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