| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3976 |
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| Symbol | |
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| ID | 3969399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4428623 |
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| End bp | 4430125 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637927080 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_533821 |
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| Protein GI | 90425451 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.833176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA CGATTCTGAT CGCCGACGAC GATGCTGTTC AGCGCAGGCT GGTCGAGAAC
ATGGTGCAGA AATGCGGCTA CCGGACCGTG GTGGTCGACA GCGGCGACGC CGCGATCGAA
ACGCTGACCG CGGACGACGC CCCCACCATC GACGCGGTGG TGCTCGATCT GGTGATGCCC
GGCCTCGACG GCATGGGTGT GCTGGAGCGG ATGCGCGACG CCGGATTGAG TATCCCGGTG
ATCGTGCAGA CCGCGCATGG CGGCATCGAC AATGTGGTGT CGGCGATGCG CGCCGGCGCC
ACCGATTTCG TGGTCAAGCC GGTCGGCATC GAGCGGCTGC AGATCAGCTT GCGCAACGCG
CTCAACGCCA GCGCCTTGAA GGGCGAATTG CAGCGGCTAA AGCACAGCCG CGACGGCAAA
TTGACCTTCG CCGATCTGGT CACCCGCAGC GAGCCGATGG GCCACGTGCT GCGGATGGCC
AAGCGCGGCG CGACCTCGGC GATCCCGGTG TTGATCGAAG GCGAATCCGG CGTCGGCAAG
GAATTGATCG CCCGCGCCAT CCACGGCTCC AGCGAGCGCA GCGCCAAGCC GTTCGTCGCG
GTGAATTGCG GCGCGATCCC CGACAATCTG GTGGAATCCA TCCTGTTCGG TCACGAGAAG
GGCGCCTTCA CCGGCGCCAC CGAACGCCAC ACCGGCAAAT TCGTCGAAGC CAGTGGCGGC
ACGCTGTTTC TCGACGAGGT CTCCGAATTG CCGCTGGCCG CGCAGGTCAA ATTGCTGCGC
GCGCTGCAGG AAGGCGCGGT CGAGGCGGTC GGCGGCCGCC GCCCGCTCAA GGTCGACGTC
CGCATCATCT CGGCGACCAA CCGCAAATTG CTCGACCGGG TCAAAGCCGG GCAGTTTCGC
GAGGATCTGT TCTACCGGCT GCACGTGCTG CCCTTGACCA TCCCGCCGTT GCGCAACCGC
CGCGAGGACA TCCCGCATCT GTTGCGGCAT TTCCTGGCGC GGTTCTGCGC CGAGGAAAAC
CGCACCATCA CCGGGGTCAG CGGCGAAGCG ATGGCGCGGC TGGCCCAGCT CGATTGGCCG
GGCAACGTCC GCCAGCTCGA GAACGCGGTG TACCGCGCCG TGGTGATGAG CGAGGGCACT
CACCTCGACC TCGCCGATTT TCCGCTCACC GCCGCCGCAC CGAGCGTCGC CGAACTGGCG
GGCGAGCCGC TGTTGATCGA ACCGGCGTTT CATTCCACCG CACCGCAATT GGTGGCCGGC
CATGACATCC CGATCGCGCC GATGCCGGCG GCCGGCAGTC TTTCGATGCT GACGCCTGAC
GGCGAGGTCC GCCCGCTCGA CGAGCTGGAG AGCGAGATCA TTCGCTTTGC GATTTCGCAT
TACCGCGGCC AGATGTCCGA AGTCGCGCGC AGGTTGAAGA TCGGCCGCTC CACGCTGTAT
CGCAAGCTCG ACGAAACCAC ACATGCGGAA CGCGAGGCTC GCGCGCCCGC AGTTTCGAAC
TGA
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| Protein sequence | MATTILIADD DAVQRRLVEN MVQKCGYRTV VVDSGDAAIE TLTADDAPTI DAVVLDLVMP
GLDGMGVLER MRDAGLSIPV IVQTAHGGID NVVSAMRAGA TDFVVKPVGI ERLQISLRNA
LNASALKGEL QRLKHSRDGK LTFADLVTRS EPMGHVLRMA KRGATSAIPV LIEGESGVGK
ELIARAIHGS SERSAKPFVA VNCGAIPDNL VESILFGHEK GAFTGATERH TGKFVEASGG
TLFLDEVSEL PLAAQVKLLR ALQEGAVEAV GGRRPLKVDV RIISATNRKL LDRVKAGQFR
EDLFYRLHVL PLTIPPLRNR REDIPHLLRH FLARFCAEEN RTITGVSGEA MARLAQLDWP
GNVRQLENAV YRAVVMSEGT HLDLADFPLT AAAPSVAELA GEPLLIEPAF HSTAPQLVAG
HDIPIAPMPA AGSLSMLTPD GEVRPLDELE SEIIRFAISH YRGQMSEVAR RLKIGRSTLY
RKLDETTHAE REARAPAVSN
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