Gene RPC_3889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3889 
Symbol 
ID3969252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4320918 
End bp4321322 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content62% 
IMG OID637926993 
Producthypothetical protein 
Protein accessionYP_533735 
Protein GI90425365 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTT TCATTGACGA TCATCGTGAG GCGCATGGGG TCGAGCCGAT CTGCAAGGTC 
TTGCCGGTCG GTCGCCCCTT CGACCTACCA CGCTCATTTC GCCAAGCGGC GCGATCCCGC
CAGGCTGTCG GGCGCTCCAG GCAGGATGCC GCGCTGAAGA TCGAGGTTCG ACGCGTGTTC
GACCAGAACT TCGCCGTCTA TGGCGTGCGC AAAGTCTGGC GGCAGCTCAA GCGCGAAGGC
TTGGATGTCG CCCGTTGTAC GGTGTCGCGG TTGATGCGGG AGATGGGTTT GCAAGGGGTG
ATCCGCGGCA AACCCATCAA AACCACAGTC AGCGACAAGG CTGCGCCATG CCCGCTCGAT
CACGTCAACC GCCAGTTCAA GGCGCCCAGG CCCAATGTCA TGTGA
 
Protein sequence
MISFIDDHRE AHGVEPICKV LPVGRPFDLP RSFRQAARSR QAVGRSRQDA ALKIEVRRVF 
DQNFAVYGVR KVWRQLKREG LDVARCTVSR LMREMGLQGV IRGKPIKTTV SDKAAPCPLD
HVNRQFKAPR PNVM