| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_3872 |
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| Symbol | |
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| ID | 3969371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | + |
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| Start bp | 4303822 |
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| End bp | 4304937 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637926978 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_533720 |
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| Protein GI | 90425350 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
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| TIGRFAM ID | [TIGR03301] 2-aminoethylphosphonate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.417724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACAAAGG AAATACCGAG GACCCGATTG TTGTTCAATC CCGGGCCAGT GTCGGTTGCA
GCGGATGTCC GCGATGCTTT GCTCTGCCTC GACATGAATC ACCGCGAACT AATCTTCGTC
GATGTCCTGG ACCGTGTTCG TCGCGGCTTG ACGGACTTGC TCGGTGGATC GGATAACTTC
ACTTGCATAC CGATTGTCGC ATCGGGATCC GGCGCCAACG AAGCCGTCAT TTCGTCCCTT
GAGGGCCCCG TCCTCGTGCT TGTGGCAGGG CGTTACTCGG AACGTTTGGC TTTGATTTGC
GAGCGATTGG GGTTGGAAAC CACTCGGGAG AATTTTGACC CGTTGCGCGG AGTTGAATTC
GATCGTATCG CCGAAGCTCT TGGCGCACAG GAACATTTCC GATCGCTCTG CTTCGTACAT
CACGAAACGA CAACCAGCGT GCTCGCGCCG CTGCGGGACA TTTGTCGCCT CGCCCGATCG
CGCGGTGTGG TTACGTTCGT TGATACGGTA AGCAGCGTCT TCGCCCACCC CATCAACGTT
GAAGAGGACG ACGTCGACTA CATCACCTTA ACGGCGAACA AGGGTCTCGA GGGATTGCCC
GGGTTATCAT TCGTGGTGGC ACGACGGGAC TTGATCGCCG GCTCAGCCGG GCGCTCGCGC
AGCTTTTACT TCGATCTGCA TCAGCAATGG AGCCGGATGG AAGGTGAAGG AAAACCACCA
TTCACTCACC CCGCCCCGCT CTATTTTGCC ACTGCCCGTG CCATCGAACG GCTCCAGGCG
GAGACCGTTC CGGGTCGGAT CTCGCGCTAC AGCGACAATC GCGCCTATCT CCGGGATCGC
TTGGCCGCAG TAGGTATCAA CCCCTACCCA CTGGCGCCCG AACGATGCAG CAATTCGCTT
TTGCTGACGT ATCGTCCGCG CGACTTTGAC TTCGATGGTA TCCAGAGCGC ACTCGCGATG
CGTGACATTG TCATCTATAC TGACCAAAGT ACACTGGCGA AAGATCTGAT GTTCTTCTCG
ACGATGGGCC AAATCGATCG CGGATGCATT GACACTCTGG TGGAAGCGCT TTGCGACGTG
TGGCGCGGAT CGGGGCGCTT GGTATCGGCG AGCTGA
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| Protein sequence | MTKEIPRTRL LFNPGPVSVA ADVRDALLCL DMNHRELIFV DVLDRVRRGL TDLLGGSDNF
TCIPIVASGS GANEAVISSL EGPVLVLVAG RYSERLALIC ERLGLETTRE NFDPLRGVEF
DRIAEALGAQ EHFRSLCFVH HETTTSVLAP LRDICRLARS RGVVTFVDTV SSVFAHPINV
EEDDVDYITL TANKGLEGLP GLSFVVARRD LIAGSAGRSR SFYFDLHQQW SRMEGEGKPP
FTHPAPLYFA TARAIERLQA ETVPGRISRY SDNRAYLRDR LAAVGINPYP LAPERCSNSL
LLTYRPRDFD FDGIQSALAM RDIVIYTDQS TLAKDLMFFS TMGQIDRGCI DTLVEALCDV
WRGSGRLVSA S
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