Gene RPC_3847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_3847 
Symbol 
ID3969460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp4275727 
End bp4276221 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content63% 
IMG OID637926957 
Producthypothetical protein 
Protein accessionYP_533699 
Protein GI90425329 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCGT GGCTCAAGTC GATCCACATT CTGGCGCTGA TAGTGTGGTG CGCGGGGCTA 
TTGGTGCTAC CCGGCCTATT CGCCCAGCGC AGCCGGCTCG AGGCCCGGCC GGCGGTCGAA
CTCAACCGCT TCACCCGGAC GTTGTTCATC GCCGTCACCT CGCCCGCGGC GTTCATCACG
GTGGTCGCAG GAACGATCCT GCTGTTTTTG CGGGAGGCGT TCACCAACTG GATGATGCTG
AAGCTGCTCG CGGTCGGGCT GCTGGTGATT CTTCACATGC GTGCCGGCTA TCTGATCCTC
AATGTGTTCG AACCGGAGGG GCACTACGCG CCGTGGCGCA GCTGGGTGAT GACCGTGGCG
ACGCTCGCGA TGATCGGCGT CATCCTCTTG CTGATCCTGA CGAAACCGCC GATCGAGCTG
GCCGCTTTGC CGCAATGGAT GCGCGAGCCC GGCGGGCTTC AATCCTTCGT CGACACCATC
AGGCCGACGC CGTGA
 
Protein sequence
MIAWLKSIHI LALIVWCAGL LVLPGLFAQR SRLEARPAVE LNRFTRTLFI AVTSPAAFIT 
VVAGTILLFL REAFTNWMML KLLAVGLLVI LHMRAGYLIL NVFEPEGHYA PWRSWVMTVA
TLAMIGVILL LILTKPPIEL AALPQWMREP GGLQSFVDTI RPTP